Functional clusters

Information

  • Type MapMan
  • Description Carbohydrate metabolism.starch metabolism.degradation.dephosphorylation.alpha-amylase-binding scaffold protein (LSF1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Hydrangea macrophylla Hma1.2p1_0858F.1 1 CH_hma_235 2 2 0.000111086
Solanum lycopersicum SL4.0ch12 1 CH_sly_330 2 2 0.0000586941
Solanum pennellii Spenn-ch12 1 CH_spe_339 2 3 0.000133434
Vigna mungo CM024070.1 1 CH_vmu_204 2 2 0.0000646141
Hydrangea macrophylla Hma1.2p1_0858F.1 2 CH_hma_235 2 2 0.000111086
Solanum lycopersicum SL4.0ch12 2 CH_sly_330 2 2 0.0000586941
Solanum pennellii Spenn-ch12 2 CH_spe_339 2 3 0.000133434
Vigna mungo CM024070.1 2 CH_vmu_204 2 2 0.0000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001