Functional clusters

Information

  • Type MapMan
  • Description Carbohydrate metabolism.fermentation.acetic acid biosynthesis.aldehyde dehydrogenase (ALDH2B)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_3703_HRSCAF_3719 1 CH_ama_32 3 5 0.00000111494
Beta vulgaris Chr6_EL10_PGA_scaffold0 1 CH_bvu_84 3 3 0.0000000411285
Chenopodium quinoa C_Quinoa_Scaffold_1214 1 CH_cqu_562 2 2 0.000710732
Chenopodium quinoa C_Quinoa_Scaffold_3035 1 CH_cqu_563 2 2 0.000710732
Fragaria x ananassa Fvb4-3 1 CH_fan_634 2 2 0.000832663
Helianthus annuus HanXRQChr09 1 CH_han_648 2 2 0.000386429
Magnolia biondii Chr14 1 CH_mbi_566 2 3 0.000437077
Malus domestica Chr13 1 CH_mdo_723 2 3 0.000682551
Quercus lobata 3 1 CH_qlo_418 3 4 0.000000159926
Selenicereus undatus Scaffold_19641 1 CH_sun_214 2 2 0.000217992
Tripterygium wilfordii NC_052246.1 1 CH_twi_270 2 3 0.000501733
Avicennia marina ScioBoG_3703_HRSCAF_3719 2 CH_ama_32 3 5 0.00000111494
Beta vulgaris Chr6_EL10_PGA_scaffold0 2 CH_bvu_84 3 3 0.0000000411285
Chenopodium quinoa C_Quinoa_Scaffold_1214 2 CH_cqu_562 2 2 0.000710732
Chenopodium quinoa C_Quinoa_Scaffold_3035 2 CH_cqu_563 2 2 0.000710732
Eucalyptus grandis Chr09 2 CH_egr_909 2 2 0.000585274
Fragaria x ananassa Fvb4-3 2 CH_fan_634 2 2 0.000832663
Helianthus annuus HanXRQChr09 2 CH_han_648 2 2 0.000386429
Magnolia biondii Chr14 2 CH_mbi_566 2 3 0.000437077
Malus domestica Chr13 2 CH_mdo_723 2 3 0.000682551
Quercus lobata 3 2 CH_qlo_418 3 4 0.000000159926
Selenicereus undatus Scaffold_19641 2 CH_sun_214 2 2 0.000217992
Tripterygium wilfordii NC_052246.1 2 CH_twi_270 2 3 0.000501733

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001