Functional clusters

Information

  • Type MapMan
  • Description Carbohydrate metabolism.sucrose metabolism.degradation.hexokinase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Beta vulgaris Chr9_EL10_PGA_scaffold8 1 CH_bvu_301 2 2 0.000827917
Chenopodium quinoa C_Quinoa_Scaffold_4319 1 CH_cqu_193 3 3 0.000000555667
Olea europaea chr13 1 CH_oeu_339 3 22 0.000367709
Papaver somniferum NC_039364.1 1 CH_pso_327 5 80 0.00000300509
Papaver somniferum NC_039367.1 1 CH_pso_384 3 5 0.0000197767
Simmondsia chinensis GWHAASQ00000015 1 CH_sci_308 2 2 0.000851426
Sequoiadendron giganteum chr4 1 CH_sgi_1247 2 2 0.000292291
Beta vulgaris Chr9_EL10_PGA_scaffold8 2 CH_bvu_301 2 2 0.000827917
Chenopodium quinoa C_Quinoa_Scaffold_4319 2 CH_cqu_193 3 3 0.000000555667
Olea europaea chr13 2 CH_oeu_339 3 22 0.000367709
Papaver somniferum NC_039364.1 2 CH_pso_327 5 80 0.00000300509
Papaver somniferum NC_039367.1 2 CH_pso_384 3 5 0.0000197767
Simmondsia chinensis GWHAASQ00000015 2 CH_sci_308 2 2 0.000851426
Sequoiadendron giganteum chr4 2 CH_sgi_1247 2 2 0.000292291

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001