Functional clusters

Information

  • Type MapMan
  • Description Carbohydrate metabolism.sucrose metabolism.degradation.sucrose synthase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB03 1 CH_bca_335 3 3 0.000000559315
Brassica carinata ChrC08 1 CH_bca_391 3 4 0.00000223697
Chara braunii BFEA01000189 1 CH_cbr_50 3 6 0.0000186126
Eucalyptus grandis Chr03 1 CH_egr_252 5 9 0.000000000033268
Lonicera japonica GWHAAZE00000003 1 CH_lonja_240 3 4 0.000000753098
Medicago truncatula chr6 1 CH_mtr_359 3 4 0.000000850717
Quercus lobata 11 1 CH_qlo_509 3 5 0.00000139916
Solanum lycopersicum SL4.0ch07 1 CH_sly_565 2 2 0.000880411
Solanum tuberosum ST4.03ch07 1 CH_stu_613 2 2 0.000768679
Brassica carinata ChrB03 2 CH_bca_335 3 3 0.000000559315
Brassica carinata ChrC08 2 CH_bca_391 3 4 0.00000223697
Chara braunii BFEA01000189 2 CH_cbr_50 3 6 0.0000186126
Eucalyptus grandis Chr03 2 CH_egr_252 5 9 0.000000000033268
Lonicera japonica GWHAAZE00000003 2 CH_lonja_240 3 4 0.000000753098
Quercus lobata 11 2 CH_qlo_509 3 5 0.00000139916
Solanum lycopersicum SL4.0ch07 2 CH_sly_565 2 2 0.000880411
Solanum tuberosum ST4.03ch07 2 CH_stu_613 2 2 0.000768679

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001