Functional clusters

Information

  • Type MapMan
  • Description External stimuli response.pathogen.defense mechanisms.WRKY33-dependent plant immunity.WRKY33-activating protein (SIB)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica oleracea C4 1 CH_bol_383 2 2 0.000490292
Brassica rapa A04 1 CH_bra_314 2 2 0.000429314
Carya illinoinensis Chr07 1 CH_cil_555 2 2 0.000929742
Citrullus lanatus CG_Chr02 1 CH_cla_221 2 2 0.000887115
Cucumis melo chr05 1 CH_cme_303 2 2 0.000667111
Cucumis sativus L. chr2 1 CH_csa_322 2 2 0.000834759
Manihot esculenta Chromosome08 1 CH_mes_493 2 2 0.000915947
Quercus lobata 3 1 CH_qlo_428 4 22 0.000000211007
Salix brachista GWHAAZH00000019 1 CH_sbr_124 3 3 0.000000500331
Brassica oleracea C4 2 CH_bol_383 2 2 0.000490292
Brassica rapa A04 2 CH_bra_314 2 2 0.000429314
Carya illinoinensis Chr07 2 CH_cil_555 2 2 0.000929742
Citrullus lanatus CG_Chr02 2 CH_cla_221 2 2 0.000887115
Cucumis melo chr05 2 CH_cme_303 2 2 0.000667111
Cucumis sativus L. chr2 2 CH_csa_322 2 2 0.000834759
Manihot esculenta Chromosome08 2 CH_mes_493 2 2 0.000915947
Quercus lobata 3 2 CH_qlo_428 4 22 0.000000211007
Salix brachista GWHAAZH00000019 2 CH_sbr_124 3 3 0.000000500331

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001