Functional clusters

Information

  • Type MapMan
  • Description External stimuli response.pathogen.effector-triggered immunity (ETI) network.immunity suppressor protein (SOBER/TIPSY)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_7 1 CH_aly_378 2 2 0.000396027
Arabidopsis thaliana Chr4 1 CH_ath_228 2 2 0.0000286492
Brassica carinata Contig885 1 CH_bca_635 2 2 0.0000641293
Cannabis sativa NC_044371.1 1 CH_cansat_241 2 2 0.0000656642
Cardamine hirsuta Chr7 1 CH_chi_255 2 2 0.0000691204
Capsella rubella scaffold_7 1 CH_cru_278 2 2 0.0000731154
Helianthus annuus HanXRQChr01 1 CH_han_193 3 4 0.00000000895963
Lupinus albus Lalb_Chr15 1 CH_lal_244 2 3 0.000157443
Micromonas commoda Chr_05 1 CH_mco_35 2 2 0.000593883
Oryza sativa ssp. japonica chr04 1 CH_osa_216 2 2 0.0000528123
Quercus lobata 10 1 CH_qlo_1042 2 4 0.00092924
Zea mays 2 1 CH_zma_198 2 2 0.000153394
Arabidopsis lyrata scaffold_7 2 CH_aly_378 2 2 0.000396027
Arabidopsis thaliana Chr4 2 CH_ath_228 2 2 0.0000286492
Brassica carinata Contig885 2 CH_bca_635 2 2 0.0000641293
Cannabis sativa NC_044371.1 2 CH_cansat_241 2 2 0.0000656642
Cardamine hirsuta Chr7 2 CH_chi_255 2 2 0.0000691204
Capsella rubella scaffold_7 2 CH_cru_278 2 2 0.0000731154
Helianthus annuus HanXRQChr01 2 CH_han_193 3 4 0.00000000895963
Lupinus albus Lalb_Chr15 2 CH_lal_244 2 3 0.000157443
Micromonas commoda Chr_05 2 CH_mco_35 2 2 0.000593883
Oryza sativa ssp. japonica chr04 2 CH_osa_216 2 2 0.0000528123
Quercus lobata 10 2 CH_qlo_1042 2 4 0.00092924
Zea mays 2 2 CH_zma_198 2 2 0.000153394

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001