Functional clusters
Information
- Type MapMan
- Description External stimuli response.pathogen.effector-triggered immunity (ETI) network.immunity suppressor protein (SOBER/TIPSY)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis lyrata | scaffold_7 | 1 | CH_aly_378 | 2 | 2 | 0.000396027 |
Arabidopsis thaliana | Chr4 | 1 | CH_ath_228 | 2 | 2 | 0.0000286492 |
Brassica carinata | Contig885 | 1 | CH_bca_635 | 2 | 2 | 0.0000641293 |
Cannabis sativa | NC_044371.1 | 1 | CH_cansat_241 | 2 | 2 | 0.0000656642 |
Cardamine hirsuta | Chr7 | 1 | CH_chi_255 | 2 | 2 | 0.0000691204 |
Capsella rubella | scaffold_7 | 1 | CH_cru_278 | 2 | 2 | 0.0000731154 |
Helianthus annuus | HanXRQChr01 | 1 | CH_han_193 | 3 | 4 | 0.00000000895963 |
Lupinus albus | Lalb_Chr15 | 1 | CH_lal_244 | 2 | 3 | 0.000157443 |
Micromonas commoda | Chr_05 | 1 | CH_mco_35 | 2 | 2 | 0.000593883 |
Oryza sativa ssp. japonica | chr04 | 1 | CH_osa_216 | 2 | 2 | 0.0000528123 |
Quercus lobata | 10 | 1 | CH_qlo_1042 | 2 | 4 | 0.00092924 |
Zea mays | 2 | 1 | CH_zma_198 | 2 | 2 | 0.000153394 |
Arabidopsis lyrata | scaffold_7 | 2 | CH_aly_378 | 2 | 2 | 0.000396027 |
Arabidopsis thaliana | Chr4 | 2 | CH_ath_228 | 2 | 2 | 0.0000286492 |
Brassica carinata | Contig885 | 2 | CH_bca_635 | 2 | 2 | 0.0000641293 |
Cannabis sativa | NC_044371.1 | 2 | CH_cansat_241 | 2 | 2 | 0.0000656642 |
Cardamine hirsuta | Chr7 | 2 | CH_chi_255 | 2 | 2 | 0.0000691204 |
Capsella rubella | scaffold_7 | 2 | CH_cru_278 | 2 | 2 | 0.0000731154 |
Helianthus annuus | HanXRQChr01 | 2 | CH_han_193 | 3 | 4 | 0.00000000895963 |
Lupinus albus | Lalb_Chr15 | 2 | CH_lal_244 | 2 | 3 | 0.000157443 |
Micromonas commoda | Chr_05 | 2 | CH_mco_35 | 2 | 2 | 0.000593883 |
Oryza sativa ssp. japonica | chr04 | 2 | CH_osa_216 | 2 | 2 | 0.0000528123 |
Quercus lobata | 10 | 2 | CH_qlo_1042 | 2 | 4 | 0.00092924 |
Zea mays | 2 | 2 | CH_zma_198 | 2 | 2 | 0.000153394 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |