Functional clusters

Information

  • Type MapMan
  • Description External stimuli response.pathogen.effector-triggered immunity (ETI) network.EDS1-PAD4/SAG101 signalling heterodimers.component PAD4

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Capsella rubella scaffold_5 1 CH_cru_266 2 2 0.0000731154
Eutrema salsugineum scaffold_16 1 CH_esa_173 2 2 0.0000761499
Manihot esculenta Chromosome12 1 CH_mes_402 2 4 0.000366356
Punica granatum NC_045132.1 1 CH_pgr_363 2 2 0.000750356
Salix brachista GWHAAZH00000005 1 CH_sbr_287 2 2 0.000189042
Sequoiadendron giganteum chr7 1 CH_sgi_1262 3 7 0.000323369
Sequoiadendron giganteum chr5 1 CH_sgi_35 13 48 5.39755e-28
Theobroma cacao Chromosome_1 1 CH_tca_322 2 4 0.000219708
Trifolium pratense Tp57577_TGAC_v2_LG3 1 CH_tpr_284 2 3 0.000227083
Tripterygium wilfordii NC_052253.1 1 CH_twi_175 2 2 0.0000557507
Capsella rubella scaffold_5 2 CH_cru_266 2 2 0.0000731154
Eutrema salsugineum scaffold_16 2 CH_esa_173 2 2 0.0000761499
Manihot esculenta Chromosome12 2 CH_mes_402 2 4 0.000366356
Punica granatum NC_045132.1 2 CH_pgr_363 2 2 0.000750356
Salix brachista GWHAAZH00000005 2 CH_sbr_287 2 2 0.000189042
Sequoiadendron giganteum chr7 2 CH_sgi_1262 3 7 0.000323369
Sequoiadendron giganteum chr5 2 CH_sgi_35 13 48 5.39755e-28
Theobroma cacao Chromosome_1 2 CH_tca_322 2 4 0.000219708
Trifolium pratense Tp57577_TGAC_v2_LG3 2 CH_tpr_284 2 3 0.000227083
Tripterygium wilfordii NC_052253.1 2 CH_twi_175 2 2 0.0000557507

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001