Functional clusters

Information

  • Type MapMan
  • Description External stimuli response.pathogen.effector-triggered immunity (ETI) network.regulatory protein (NDR1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-8 1 CH_aar_165 2 2 0.0000912326
Arabidopsis lyrata scaffold_3 1 CH_aly_77 3 3 0.00000000653509
Arabidopsis thaliana Chr3 1 CH_ath_94 3 5 0.0000000123115
Amborella trichopoda AmTr_v1.0_scaffold00037 1 CH_atr_323 2 5 0.000794313
Beta vulgaris Chr4_EL10_PGA_scaffold1 1 CH_bvu_193 2 2 0.0000827917
Corylus avellana 4 1 CH_cav_276 2 2 0.0000766695
Carpinus fangiana Cfa08 1 CH_cfa_241 2 2 0.0000757346
Carya illinoinensis Chr11 1 CH_cil_406 2 3 0.000185943
Chenopodium quinoa C_Quinoa_Scaffold_1529 1 CH_cqu_586 2 4 0.000852811
Capsella rubella scaffold_3 1 CH_cru_277 2 2 0.0000731154
Durio zibethinus NW_019167993.1 1 CH_dzi_235 2 2 0.000139047
Eutrema salsugineum scaffold_13 1 CH_esa_188 2 2 0.0000761499
Magnolia biondii Chr18 1 CH_mbi_69 4 5 0.00000000000859158
Malus domestica Chr03 1 CH_mdo_166 3 3 0.00000000862825
Nelumbo nucifera chr1 1 CH_nnu_390 2 3 0.000392399
Olea europaea chr6 1 CH_oeu_321 2 2 0.000320273
Sechium edule LG07 1 CH_sed_211 2 2 0.0000713419
Schrenkiella parvula ch3-1 1 CH_spa_88 3 5 0.0000000929819
Trochodendron aralioides group3 1 CH_tar_102 3 3 0.000000021627
Aethionema arabicum LG-8 2 CH_aar_165 2 2 0.0000912326
Arabidopsis lyrata scaffold_3 2 CH_aly_77 3 3 0.00000000653509
Arabidopsis thaliana Chr3 2 CH_ath_94 3 5 0.0000000123115
Amborella trichopoda AmTr_v1.0_scaffold00037 2 CH_atr_323 2 5 0.000794313
Beta vulgaris Chr4_EL10_PGA_scaffold1 2 CH_bvu_193 2 2 0.0000827917
Corylus avellana 4 2 CH_cav_276 2 2 0.0000766695
Carpinus fangiana Cfa08 2 CH_cfa_241 2 2 0.0000757346
Carya illinoinensis Chr11 2 CH_cil_406 2 3 0.000185943
Chenopodium quinoa C_Quinoa_Scaffold_1529 2 CH_cqu_586 2 4 0.000852811
Capsella rubella scaffold_3 2 CH_cru_277 2 2 0.0000731154
Durio zibethinus NW_019167993.1 2 CH_dzi_235 2 2 0.000139047
Eucalyptus grandis Chr06 2 CH_egr_759 2 3 0.000175577
Eutrema salsugineum scaffold_13 2 CH_esa_188 2 2 0.0000761499
Magnolia biondii Chr18 2 CH_mbi_69 4 5 0.00000000000859158
Malus domestica Chr03 2 CH_mdo_166 3 3 0.00000000862825
Nelumbo nucifera chr1 2 CH_nnu_390 2 3 0.000392399
Olea europaea chr6 2 CH_oeu_321 2 2 0.000320273
Sechium edule LG07 2 CH_sed_211 2 2 0.0000713419
Schrenkiella parvula ch3-1 2 CH_spa_88 3 5 0.0000000929819
Trochodendron aralioides group3 2 CH_tar_102 3 3 0.000000021627

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001