Functional clusters

Information

  • Type MapMan
  • Description External stimuli response.pathogen.effector-triggered immunity (ETI) network.RIN4-RPM1 immune signalling.CC-NLR-type effector receptor (RPM1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr3 1 CH_camsi_4 13 43 6.72892e-35
Davidia involucrata GWHABJS00000003 1 CH_din_147 3 4 0.000000525223
Fragaria vesca Fvb3 1 CH_fve_48 5 11 0.0000000000105086
Magnolia biondii Chr14 1 CH_mbi_6 12 73 2.75917e-26
Malus domestica Chr06 1 CH_mdo_6 10 46 1.33738e-24
Prunus persica Pp08 1 CH_ppe_10 13 32 3.17934e-30
Prunus persica Pp06 1 CH_ppe_107 6 21 0.000000000151909
Rosa chinensis RcHm_v2.0_Chr5 1 CH_rch_135 5 10 0.0000000000295098
Rosa chinensis RcHm_v2.0_Chr5 1 CH_rch_223 4 7 0.0000000158227
Camellia sinensis var. sinensis Chr3 2 CH_camsi_4 13 43 6.72892e-35
Davidia involucrata GWHABJS00000003 2 CH_din_147 3 4 0.000000525223
Fragaria vesca Fvb3 2 CH_fve_48 5 11 0.0000000000105086
Magnolia biondii Chr14 2 CH_mbi_6 12 73 2.75917e-26
Malus domestica Chr06 2 CH_mdo_6 10 46 1.33738e-24
Prunus persica Pp08 2 CH_ppe_10 13 32 3.17934e-30
Prunus persica Pp06 2 CH_ppe_107 6 21 0.000000000151909
Rosa chinensis RcHm_v2.0_Chr5 2 CH_rch_135 5 10 0.0000000000295098
Rosa chinensis RcHm_v2.0_Chr5 2 CH_rch_223 4 7 0.0000000158227

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001