Functional clusters

Information

  • Type MapMan
  • Description External stimuli response.temperature.cold response.cold-responsive mRNA chaperone (CSD)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cannabis sativa NC_044377.1 1 CH_cansat_379 2 2 0.000656642
Erigeron canadensis Conyza_canadensis_scaffold:2 1 CH_eca_69 4 6 0.000000000284571
Hydrangea macrophylla Hma1.2p1_0163F.1 1 CH_hma_280 2 2 0.000111086
Petunia axillaris Peaxi162Scf00635 1 CH_pax_26 5 9 0.00000000000129626
Physcomitrium patens scaffold_42 1 CH_ppa_341 2 2 0.000919089
Solanum pennellii Spenn-ch01 1 CH_spe_485 2 2 0.00044479
Cannabis sativa NC_044377.1 2 CH_cansat_379 2 2 0.000656642
Erigeron canadensis Conyza_canadensis_scaffold:2 2 CH_eca_69 4 6 0.000000000284571
Hydrangea macrophylla Hma1.2p1_0163F.1 2 CH_hma_280 2 2 0.000111086
Petunia axillaris Peaxi162Scf00635 2 CH_pax_26 5 9 0.00000000000129626
Physcomitrium patens scaffold_42 2 CH_ppa_341 2 2 0.000919089
Solanum pennellii Spenn-ch01 2 CH_spe_485 2 2 0.00044479

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001