Functional clusters

Information

  • Type MapMan
  • Description External stimuli response.symbiont.solute transport.phosphate transporter (PT4)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group3 1 CH_ach_286 2 4 0.000977694
Camellia sinensis var. sinensis Chr1 1 CH_camsi_552 2 2 0.0000458547
Cannabis sativa NC_044374.1 1 CH_cansat_329 2 4 0.000393959
Erigeron canadensis Conyza_canadensis_scaffold:1 1 CH_eca_282 2 2 0.0000448722
Magnolia biondii Chr07 1 CH_mbi_519 2 4 0.000291382
Nicotiana tabacum Nitab4.5_0000015 1 CH_nta_111 2 2 0.000109727
Rosa chinensis RcHm_v2.0_Chr1 1 CH_rch_490 2 2 0.0000398653
Solanum lycopersicum SL4.0ch06 1 CH_sly_347 2 2 0.0000586941
Solanum pennellii Spenn-ch06 1 CH_spe_296 2 2 0.000044479
Solanum tuberosum ST4.03ch06 1 CH_stu_391 2 2 0.0000512453
Trochodendron aralioides group1 1 CH_tar_272 2 2 0.0000600366
Actinidia chinensis Lachesis_group3 2 CH_ach_286 2 4 0.000977694
Camellia sinensis var. sinensis Chr1 2 CH_camsi_552 2 2 0.0000458547
Cannabis sativa NC_044374.1 2 CH_cansat_329 2 4 0.000393959
Erigeron canadensis Conyza_canadensis_scaffold:1 2 CH_eca_282 2 2 0.0000448722
Magnolia biondii Chr07 2 CH_mbi_519 2 4 0.000291382
Nicotiana tabacum Nitab4.5_0000015 2 CH_nta_111 2 2 0.000109727
Rosa chinensis RcHm_v2.0_Chr1 2 CH_rch_490 2 2 0.0000398653
Solanum lycopersicum SL4.0ch06 2 CH_sly_347 2 2 0.0000586941
Solanum pennellii Spenn-ch06 2 CH_spe_296 2 2 0.000044479
Solanum tuberosum ST4.03ch06 2 CH_stu_391 2 2 0.0000512453
Trochodendron aralioides group1 2 CH_tar_272 2 2 0.0000600366

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001