Functional clusters

Information

  • Type MapMan
  • Description External stimuli response.symbiont.symbiosis signalling pathway.CCaMK-IPD3 kinase complex.component IPD3/CYCLOPS

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 1 CH_arhy_770 2 3 0.000898109
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 1 CH_arhy_771 2 3 0.000898109
Helianthus annuus HanXRQChr03 1 CH_han_458 3 24 0.0000452906
Sequoiadendron giganteum chr5 1 CH_sgi_862 2 2 0.0000487151
Vanilla planifolia CM028161.1 1 CH_vpl_323 2 2 0.000443328
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 2 CH_arhy_770 2 3 0.000898109
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 2 CH_arhy_771 2 3 0.000898109
Helianthus annuus HanXRQChr03 2 CH_han_458 3 24 0.0000452906
Sequoiadendron giganteum chr5 2 CH_sgi_862 2 2 0.0000487151
Vanilla planifolia CM028161.1 2 CH_vpl_323 2 2 0.000443328

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001