Functional clusters

Information

  • Type MapMan
  • Description Nutrient uptake.metal homeostasis.iron.regulation.IRT1-ubiquitin ligase (IDF1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Corylus avellana 3 1 CH_cav_255 2 2 0.0000766695
Medicago truncatula chr4 1 CH_mtr_520 2 2 0.0000410863
Populus trichocarpa Chr18 1 CH_ptr_375 2 2 0.0001734
Salix brachista GWHAAZH00000018 1 CH_sbr_286 2 2 0.000189042
Corylus avellana 3 2 CH_cav_255 2 2 0.0000766695
Populus trichocarpa Chr18 2 CH_ptr_375 2 2 0.0001734
Salix brachista GWHAAZH00000018 2 CH_sbr_286 2 2 0.000189042

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001