Functional clusters
Information
- Type MapMan
- Description Solute transport.channels.VIC superfamily.voltage-gated potassium cation channel (AKT/SKOR/GORK)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_362 | 1 | CH_aag_27 | 4 | 12 | 0.0000000965824 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_12 | 1 | CH_amhyb_96 | 3 | 9 | 0.0000178414 |
| Camellia sinensis var. sinensis | Chr14 | 1 | CH_camsi_464 | 3 | 5 | 0.0000143444 |
| Carya illinoinensis | Chr03 | 1 | CH_cil_300 | 3 | 4 | 0.0000083885 |
| Cucumis melo | chr04 | 1 | CH_cme_288 | 3 | 26 | 0.000605635 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3631 | 1 | CH_cqu_92 | 4 | 4 | 0.000000000580855 |
| Chlamydomonas reinhardtii | chromosome_1 | 1 | CH_cre_7 | 4 | 5 | 0.000000000331021 |
| Erigeron canadensis | Conyza_canadensis_scaffold:6 | 1 | CH_eca_96 | 4 | 7 | 0.00000000949123 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 1 | CH_lsa_313 | 3 | 7 | 0.0000304919 |
| Sequoiadendron giganteum | chr1 | 1 | CH_sgi_332 | 5 | 23 | 0.000000000357412 |
| Selenicereus undatus | Scaffold_33676 | 1 | CH_sun_287 | 2 | 2 | 0.000726639 |
| Trochodendron aralioides | group4 | 1 | CH_tar_215 | 3 | 5 | 0.0000154554 |
| Utricularia gibba | unitig_748 | 1 | CH_ugi_297 | 2 | 2 | 0.000734592 |
| Anthoceros agrestis | Sc2ySwM_362 | 2 | CH_aag_27 | 4 | 12 | 0.0000000965824 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_12 | 2 | CH_amhyb_96 | 3 | 9 | 0.0000178414 |
| Camellia sinensis var. sinensis | Chr14 | 2 | CH_camsi_464 | 3 | 5 | 0.0000143444 |
| Carya illinoinensis | Chr03 | 2 | CH_cil_300 | 3 | 4 | 0.0000083885 |
| Cucumis melo | chr04 | 2 | CH_cme_288 | 3 | 26 | 0.000605635 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3631 | 2 | CH_cqu_92 | 4 | 4 | 0.000000000580855 |
| Chlamydomonas reinhardtii | chromosome_1 | 2 | CH_cre_7 | 4 | 5 | 0.000000000331021 |
| Erigeron canadensis | Conyza_canadensis_scaffold:6 | 2 | CH_eca_96 | 4 | 7 | 0.00000000949123 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 2 | CH_lsa_313 | 3 | 7 | 0.0000304919 |
| Sequoiadendron giganteum | chr1 | 2 | CH_sgi_332 | 5 | 23 | 0.000000000357412 |
| Selenicereus undatus | Scaffold_33676 | 2 | CH_sun_287 | 2 | 2 | 0.000726639 |
| Trochodendron aralioides | group4 | 2 | CH_tar_215 | 3 | 5 | 0.0000154554 |
| Utricularia gibba | unitig_748 | 2 | CH_ugi_297 | 2 | 2 | 0.000734592 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |