Functional clusters
Information
- Type MapMan
- Description Solute transport.channels.anion channel (SLAC)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis lyrata | scaffold_2 | 1 | CH_aly_430 | 2 | 2 | 0.000660044 |
Brassica carinata | ChrB07 | 1 | CH_bca_351 | 3 | 3 | 0.000000781396 |
Camellia sinensis var. sinensis | Chr5 | 1 | CH_camsi_292 | 4 | 18 | 0.000000185539 |
Erigeron canadensis | Conyza_canadensis_scaffold:6 | 1 | CH_eca_488 | 2 | 2 | 0.000673083 |
Eucalyptus grandis | Chr05 | 1 | CH_egr_132 | 6 | 9 | 1.09026e-16 |
Eutrema salsugineum | scaffold_8 | 1 | CH_esa_334 | 2 | 2 | 0.000761499 |
Fragaria vesca | Fvb7 | 1 | CH_fve_359 | 2 | 2 | 0.00017673 |
Hydrangea macrophylla | Hma1.2p1_0328F.1 | 1 | CH_hma_70 | 3 | 3 | 0.000000647896 |
Hydrangea macrophylla | Hma1.2p1_0142F.1 | 1 | CH_hma_91 | 3 | 7 | 0.0000226562 |
Malus domestica | Chr01 | 1 | CH_mdo_584 | 2 | 2 | 0.000227527 |
Manihot esculenta | Chromosome06 | 1 | CH_mes_504 | 2 | 2 | 0.000915947 |
Olea europaea | chr11 | 1 | CH_oeu_331 | 2 | 2 | 0.000320273 |
Prunus persica | Pp02 | 1 | CH_ppe_473 | 2 | 2 | 0.000447577 |
Rhododendron simsii | chr03 | 1 | CH_rsi_564 | 2 | 2 | 0.000645307 |
Sequoiadendron giganteum | chr7 | 1 | CH_sgi_114 | 6 | 6 | 2.85266e-18 |
Schrenkiella parvula | ch2-1 | 1 | CH_spa_307 | 2 | 2 | 0.00078734 |
Theobroma cacao | Chromosome_8 | 1 | CH_tca_450 | 2 | 2 | 0.000732386 |
Vaccinium macrocarpon | chr6_Vaccinium_macrocarpon_Stevens_v1 | 1 | CH_vma_343 | 2 | 2 | 0.000278772 |
Vigna mungo | CM024072.1 | 1 | CH_vmu_365 | 2 | 2 | 0.000387685 |
Vanilla planifolia | CM028151.1 | 1 | CH_vpl_21 | 4 | 6 | 0.000000000272264 |
Arabidopsis lyrata | scaffold_2 | 2 | CH_aly_430 | 2 | 2 | 0.000660044 |
Brassica carinata | ChrB07 | 2 | CH_bca_351 | 3 | 3 | 0.000000781396 |
Camellia sinensis var. sinensis | Chr5 | 2 | CH_camsi_292 | 4 | 18 | 0.000000185539 |
Erigeron canadensis | Conyza_canadensis_scaffold:6 | 2 | CH_eca_488 | 2 | 2 | 0.000673083 |
Eucalyptus grandis | Chr05 | 2 | CH_egr_132 | 6 | 9 | 1.09026e-16 |
Eutrema salsugineum | scaffold_8 | 2 | CH_esa_334 | 2 | 2 | 0.000761499 |
Fragaria vesca | Fvb7 | 2 | CH_fve_359 | 2 | 2 | 0.00017673 |
Hydrangea macrophylla | Hma1.2p1_0328F.1 | 2 | CH_hma_70 | 3 | 3 | 0.000000647896 |
Hydrangea macrophylla | Hma1.2p1_0142F.1 | 2 | CH_hma_91 | 3 | 7 | 0.0000226562 |
Malus domestica | Chr01 | 2 | CH_mdo_584 | 2 | 2 | 0.000227527 |
Manihot esculenta | Chromosome06 | 2 | CH_mes_504 | 2 | 2 | 0.000915947 |
Olea europaea | chr11 | 2 | CH_oeu_331 | 2 | 2 | 0.000320273 |
Prunus persica | Pp02 | 2 | CH_ppe_473 | 2 | 2 | 0.000447577 |
Rhododendron simsii | chr03 | 2 | CH_rsi_564 | 2 | 2 | 0.000645307 |
Sequoiadendron giganteum | chr7 | 2 | CH_sgi_114 | 6 | 6 | 2.85266e-18 |
Schrenkiella parvula | ch2-1 | 2 | CH_spa_307 | 2 | 2 | 0.00078734 |
Theobroma cacao | Chromosome_8 | 2 | CH_tca_450 | 2 | 2 | 0.000732386 |
Vaccinium macrocarpon | chr6_Vaccinium_macrocarpon_Stevens_v1 | 2 | CH_vma_343 | 2 | 2 | 0.000278772 |
Vigna mungo | CM024072.1 | 2 | CH_vmu_365 | 2 | 2 | 0.000387685 |
Vanilla planifolia | CM028151.1 | 2 | CH_vpl_21 | 4 | 6 | 0.000000000272264 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |