Functional clusters

Information

  • Type MapMan
  • Description Solute transport.channels.anion channel (SLAC)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_2 1 CH_aly_430 2 2 0.000660044
Brassica carinata ChrB07 1 CH_bca_351 3 3 0.000000781396
Camellia sinensis var. sinensis Chr5 1 CH_camsi_292 4 18 0.000000185539
Erigeron canadensis Conyza_canadensis_scaffold:6 1 CH_eca_488 2 2 0.000673083
Eucalyptus grandis Chr05 1 CH_egr_132 6 9 1.09026e-16
Eutrema salsugineum scaffold_8 1 CH_esa_334 2 2 0.000761499
Fragaria vesca Fvb7 1 CH_fve_359 2 2 0.00017673
Hydrangea macrophylla Hma1.2p1_0328F.1 1 CH_hma_70 3 3 0.000000647896
Hydrangea macrophylla Hma1.2p1_0142F.1 1 CH_hma_91 3 7 0.0000226562
Malus domestica Chr01 1 CH_mdo_584 2 2 0.000227527
Manihot esculenta Chromosome06 1 CH_mes_504 2 2 0.000915947
Olea europaea chr11 1 CH_oeu_331 2 2 0.000320273
Prunus persica Pp02 1 CH_ppe_473 2 2 0.000447577
Rhododendron simsii chr03 1 CH_rsi_564 2 2 0.000645307
Sequoiadendron giganteum chr7 1 CH_sgi_114 6 6 2.85266e-18
Schrenkiella parvula ch2-1 1 CH_spa_307 2 2 0.00078734
Theobroma cacao Chromosome_8 1 CH_tca_450 2 2 0.000732386
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_343 2 2 0.000278772
Vigna mungo CM024072.1 1 CH_vmu_365 2 2 0.000387685
Vanilla planifolia CM028151.1 1 CH_vpl_21 4 6 0.000000000272264
Arabidopsis lyrata scaffold_2 2 CH_aly_430 2 2 0.000660044
Brassica carinata ChrB07 2 CH_bca_351 3 3 0.000000781396
Camellia sinensis var. sinensis Chr5 2 CH_camsi_292 4 18 0.000000185539
Erigeron canadensis Conyza_canadensis_scaffold:6 2 CH_eca_488 2 2 0.000673083
Eucalyptus grandis Chr05 2 CH_egr_132 6 9 1.09026e-16
Eutrema salsugineum scaffold_8 2 CH_esa_334 2 2 0.000761499
Fragaria vesca Fvb7 2 CH_fve_359 2 2 0.00017673
Hydrangea macrophylla Hma1.2p1_0328F.1 2 CH_hma_70 3 3 0.000000647896
Hydrangea macrophylla Hma1.2p1_0142F.1 2 CH_hma_91 3 7 0.0000226562
Malus domestica Chr01 2 CH_mdo_584 2 2 0.000227527
Manihot esculenta Chromosome06 2 CH_mes_504 2 2 0.000915947
Olea europaea chr11 2 CH_oeu_331 2 2 0.000320273
Prunus persica Pp02 2 CH_ppe_473 2 2 0.000447577
Rhododendron simsii chr03 2 CH_rsi_564 2 2 0.000645307
Sequoiadendron giganteum chr7 2 CH_sgi_114 6 6 2.85266e-18
Schrenkiella parvula ch2-1 2 CH_spa_307 2 2 0.00078734
Theobroma cacao Chromosome_8 2 CH_tca_450 2 2 0.000732386
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_343 2 2 0.000278772
Vigna mungo CM024072.1 2 CH_vmu_365 2 2 0.000387685
Vanilla planifolia CM028151.1 2 CH_vpl_21 4 6 0.000000000272264

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001