Functional clusters

Information

  • Type MapMan
  • Description Solute transport.carrier-mediated transport.CDF superfamily.CaCA family.cation antiporter (CAX)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_1 1 CH_aly_412 2 2 0.000660044
Arabidopsis thaliana Chr1 1 CH_ath_372 2 2 0.000429738
Brassica carinata Contig1138 1 CH_bca_409 3 4 0.00000364595
Corchorus olitorius AWUE01013456.1 1 CH_col_116 2 2 0.000876296
Fragaria x ananassa Fvb6-3 1 CH_fan_601 3 17 0.000705319
Lonicera japonica GWHAAZE00000001 1 CH_lonja_636 2 2 0.000898311
Marchantia polymorpha scaffold_30 1 CH_mpo_100 2 2 0.000331327
Olea europaea chr18 1 CH_oeu_77 3 5 0.00000042735
Quercus lobata 8 1 CH_qlo_551 3 7 0.00000489604
Rosa chinensis RcHm_v2.0_Chr3 1 CH_rch_806 2 2 0.00083717
Rhododendron simsii chr06 1 CH_rsi_311 3 11 0.0000360364
Sequoiadendron giganteum chr4 1 CH_sgi_1392 2 4 0.000876801
Theobroma cacao Chromosome_7 1 CH_tca_161 3 3 0.000000160923
Arabidopsis lyrata scaffold_1 2 CH_aly_412 2 2 0.000660044
Arabidopsis thaliana Chr1 2 CH_ath_372 2 2 0.000429738
Brassica carinata Contig1138 2 CH_bca_409 3 4 0.00000364595
Corchorus olitorius AWUE01013456.1 2 CH_col_116 2 2 0.000876296
Fragaria x ananassa Fvb6-3 2 CH_fan_601 3 17 0.000705319
Lonicera japonica GWHAAZE00000001 2 CH_lonja_636 2 2 0.000898311
Marchantia polymorpha scaffold_30 2 CH_mpo_100 2 2 0.000331327
Olea europaea chr18 2 CH_oeu_77 3 5 0.00000042735
Quercus lobata 8 2 CH_qlo_551 3 7 0.00000489604
Rosa chinensis RcHm_v2.0_Chr3 2 CH_rch_806 2 2 0.00083717
Rhododendron simsii chr06 2 CH_rsi_311 3 11 0.0000360364
Sequoiadendron giganteum chr4 2 CH_sgi_1392 2 4 0.000876801
Theobroma cacao Chromosome_7 2 CH_tca_161 3 3 0.000000160923

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001