Functional clusters

Information

  • Type MapMan
  • Description Solute transport.carrier-mediated transport.APC superfamily.borate transporter (BOR)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group27 1 CH_ach_243 2 2 0.000543213
Beta vulgaris Chr9_EL10_PGA_scaffold8 1 CH_bvu_88 4 15 0.0000000812202
Chenopodium quinoa C_Quinoa_Scaffold_3333 1 CH_cqu_288 3 6 0.0000192515
Chenopodium quinoa C_Quinoa_Scaffold_1992 1 CH_cqu_300 3 7 0.0000336833
Fragaria vesca Fvb4 1 CH_fve_463 3 28 0.000595137
Lonicera japonica GWHAAZE00000007 1 CH_lonja_613 2 2 0.000598874
Lactuca sativa Lsat_1_v8_lg_3 1 CH_lsa_556 3 12 0.0009908
Oryza sativa ssp. japonica chr01 1 CH_osa_405 2 4 0.000950562
Punica granatum NC_045127.1 1 CH_pgr_66 4 5 0.000000000798421
Quercus lobata 5 1 CH_qlo_140 5 5 0.000000000000024623
Sequoiadendron giganteum chr5 1 CH_sgi_234 5 6 0.000000000000761006
Sequoiadendron giganteum chr5 1 CH_sgi_336 4 4 0.000000000473454
Actinidia chinensis Lachesis_group27 2 CH_ach_243 2 2 0.000543213
Beta vulgaris Chr9_EL10_PGA_scaffold8 2 CH_bvu_88 4 15 0.0000000812202
Chenopodium quinoa C_Quinoa_Scaffold_3333 2 CH_cqu_288 3 6 0.0000192515
Chenopodium quinoa C_Quinoa_Scaffold_1992 2 CH_cqu_300 3 7 0.0000336833
Fragaria vesca Fvb4 2 CH_fve_463 3 28 0.000595137
Lonicera japonica GWHAAZE00000007 2 CH_lonja_613 2 2 0.000598874
Lactuca sativa Lsat_1_v8_lg_3 2 CH_lsa_556 3 12 0.0009908
Oryza sativa ssp. japonica chr01 2 CH_osa_405 2 4 0.000950562
Punica granatum NC_045127.1 2 CH_pgr_66 4 5 0.000000000798421
Quercus lobata 5 2 CH_qlo_140 5 5 0.000000000000024623
Sequoiadendron giganteum chr5 2 CH_sgi_234 5 6 0.000000000000761006
Sequoiadendron giganteum chr5 2 CH_sgi_336 4 4 0.000000000473454

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001