Functional clusters

Information

  • Type MapMan
  • Description Solute transport.carrier-mediated transport.APC superfamily.NCS-2 family.solute transporter (NAT)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr10 1 CH_acertr_60 5 14 0.000000000476235
Camellia sinensis var. sinensis Chr3 1 CH_camsi_346 4 14 0.000000883576
Manihot esculenta Chromosome07 1 CH_mes_16 9 9 5.60259e-25
Nicotiana tabacum Nitab4.5_0000497 1 CH_nta_52 3 3 0.00000101142
Physcomitrium patens Chr16 1 CH_ppa_49 3 4 0.00000270269
Rhododendron simsii chr11 1 CH_rsi_139 4 5 0.00000000550082
Sapria himalayana scaffold58_3239794 1 CH_shi_218 2 2 0.000571804
Trifolium pratense Tp57577_TGAC_v2_scaf_354 1 CH_tpr_158 3 3 0.00000391093
Acer truncatum chr10 2 CH_acertr_60 5 14 0.000000000476235
Camellia sinensis var. sinensis Chr3 2 CH_camsi_346 4 14 0.000000883576
Manihot esculenta Chromosome07 2 CH_mes_16 9 9 5.60259e-25
Nicotiana tabacum Nitab4.5_0000497 2 CH_nta_52 3 3 0.00000101142
Physcomitrium patens Chr16 2 CH_ppa_49 3 4 0.00000270269
Rhododendron simsii chr11 2 CH_rsi_139 4 5 0.00000000550082
Sapria himalayana scaffold58_3239794 2 CH_shi_218 2 2 0.000571804
Trifolium pratense Tp57577_TGAC_v2_scaf_354 2 CH_tpr_158 3 3 0.00000391093

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001