Functional clusters

Information

  • Type MapMan
  • Description Solute transport.carrier-mediated transport.MFS superfamily.DHA-1 family.metal chelator transporter (TCR)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_3 1 CH_aly_137 3 4 0.000000522751
Arabidopsis lyrata scaffold_8 1 CH_aly_158 3 5 0.00000130674
Arabidopsis thaliana Chr2 1 CH_ath_163 3 12 0.0000010832
Amborella trichopoda AmTr_v1.0_scaffold00001 1 CH_atr_252 2 2 0.000238322
Brassica carinata ChrB02 1 CH_bca_1162 2 2 0.000961939
Brassica carinata ChrB08 1 CH_bca_231 3 3 0.0000000822522
Beta vulgaris Chr6_EL10_PGA_scaffold0 1 CH_bvu_37 4 4 0.0000000000255404
Camellia sinensis var. sinensis Chr4 1 CH_camsi_339 3 4 0.000000706432
Coffea canephora chr2 1 CH_ccan_29 4 7 0.000000000000567771
Coffea canephora chr0 1 CH_ccan_83 3 11 0.000000182821
Cardamine hirsuta Chr3 1 CH_chi_123 3 4 0.00000011466
Cucumis melo chr03 1 CH_cme_87 3 3 0.0000000667579
Carica papaya supercontig_20 1 CH_cpa_62 3 3 0.00000013557
Capsella rubella scaffold_3 1 CH_cru_29 5 6 0.00000000000000771732
Cucumis sativus L. chr2 1 CH_csa_110 3 3 0.000000104528
Erigeron canadensis Conyza_canadensis_scaffold:2 1 CH_eca_391 2 2 0.000269233
Erythranthe guttata scaffold_2 1 CH_egut_70 4 4 0.0000000000405409
Eutrema salsugineum scaffold_11 1 CH_esa_171 2 2 0.0000761499
Fragaria vesca Fvb2 1 CH_fve_397 2 2 0.000353461
Lupinus albus Lalb_Chr21 1 CH_lal_362 2 2 0.000524824
Magnolia biondii Chr17 1 CH_mbi_148 3 4 0.0000000566069
Petunia axillaris Peaxi162Scf00173 1 CH_pax_106 3 3 0.000000415808
Rosa chinensis RcHm_v2.0_Chr6 1 CH_rch_661 2 2 0.000239192
Solanum lycopersicum SL4.0ch11 1 CH_sly_546 2 2 0.000880411
Solanum pennellii Spenn-ch11 1 CH_spe_562 2 2 0.00093406
Selenicereus undatus Scaffold_19641 1 CH_sun_238 2 2 0.000435983
Vanilla planifolia CM028161.1 1 CH_vpl_302 2 4 0.000443295
Arabidopsis lyrata scaffold_3 2 CH_aly_137 3 4 0.000000522751
Arabidopsis lyrata scaffold_8 2 CH_aly_158 3 5 0.00000130674
Arabidopsis thaliana Chr2 2 CH_ath_163 3 12 0.0000010832
Amborella trichopoda AmTr_v1.0_scaffold00001 2 CH_atr_252 2 2 0.000238322
Brassica carinata ChrB02 2 CH_bca_1162 2 2 0.000961939
Brassica carinata ChrB08 2 CH_bca_231 3 3 0.0000000822522
Beta vulgaris Chr6_EL10_PGA_scaffold0 2 CH_bvu_37 4 4 0.0000000000255404
Camellia sinensis var. sinensis Chr4 2 CH_camsi_339 3 4 0.000000706432
Coffea canephora chr2 2 CH_ccan_29 4 7 0.000000000000567771
Coffea canephora chr0 2 CH_ccan_83 3 11 0.000000182821
Cardamine hirsuta Chr3 2 CH_chi_123 3 4 0.00000011466
Cucumis melo chr03 2 CH_cme_87 3 3 0.0000000667579
Carica papaya supercontig_20 2 CH_cpa_62 3 3 0.00000013557
Capsella rubella scaffold_3 2 CH_cru_29 5 6 0.00000000000000771732
Cucumis sativus L. chr2 2 CH_csa_110 3 3 0.000000104528
Erigeron canadensis Conyza_canadensis_scaffold:2 2 CH_eca_391 2 2 0.000269233
Erythranthe guttata scaffold_2 2 CH_egut_70 4 4 0.0000000000405409
Eutrema salsugineum scaffold_11 2 CH_esa_171 2 2 0.0000761499
Fragaria vesca Fvb2 2 CH_fve_397 2 2 0.000353461
Lupinus albus Lalb_Chr21 2 CH_lal_362 2 2 0.000524824
Magnolia biondii Chr17 2 CH_mbi_148 3 4 0.0000000566069
Petunia axillaris Peaxi162Scf00173 2 CH_pax_106 3 3 0.000000415808
Rosa chinensis RcHm_v2.0_Chr6 2 CH_rch_661 2 2 0.000239192
Solanum lycopersicum SL4.0ch11 2 CH_sly_546 2 2 0.000880411
Solanum pennellii Spenn-ch11 2 CH_spe_562 2 2 0.00093406
Selenicereus undatus Scaffold_19641 2 CH_sun_238 2 2 0.000435983
Vanilla planifolia CM028161.1 2 CH_vpl_302 2 4 0.000443295

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001