Functional clusters

Information

  • Type MapMan
  • Description Solute transport.carrier-mediated transport.MFS superfamily.solute transporter (UNE2)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_117 1 CH_aag_47 3 7 0.00000675996
Aethionema arabicum LG-8 1 CH_aar_273 2 2 0.000912326
Acer truncatum chr4 1 CH_acertr_507 2 2 0.000422982
Aquilegia oxysepala CHR06 1 CH_aox_235 2 2 0.000240597
Brassica carinata ChrB05 1 CH_bca_100 4 7 0.0000000003384
Brassica oleracea C7 1 CH_bol_446 2 3 0.000980536
Beta vulgaris Chr6_EL10_PGA_scaffold0 1 CH_bvu_275 2 2 0.00049675
Camellia sinensis var. sinensis Chr1 1 CH_camsi_32 6 7 8.94194e-19
Corylus avellana 8 1 CH_cav_167 3 7 0.00000308499
Chara braunii BFEA01000343 1 CH_cbr_80 3 24 0.000156776
Citrus clementina scaffold_7 1 CH_ccl_143 3 3 0.000000100941
Ceratophyllum demersum 2 1 CH_cde_192 2 2 0.000236939
Carya illinoinensis Chr03 1 CH_cil_492 2 2 0.000371897
Chlamydomonas reinhardtii chromosome_6 1 CH_cre_34 2 2 0.000113733
Daucus carota DCARv2_Chr9 1 CH_dca_481 2 2 0.000956663
Daucus carota DCARv2_Chr5 1 CH_dca_482 2 2 0.000956663
Erigeron canadensis Conyza_canadensis_scaffold:2 1 CH_eca_368 2 2 0.000134617
Fragaria vesca Fvb1 1 CH_fve_409 2 2 0.000353461
Glycine max Gm08 1 CH_gma_523 2 2 0.000379557
Gossypium raimondii Chr07 1 CH_gra_365 2 2 0.000321664
Helianthus annuus HanXRQChr09 1 CH_han_515 2 2 0.000115929
Hydrangea macrophylla Hma1.2p1_0308F.1 1 CH_hma_365 2 2 0.000333259
Lactuca sativa Lsat_1_v8_lg_4 1 CH_lsa_407 2 2 0.000154202
Magnolia biondii Chr02 1 CH_mbi_470 2 2 0.000145698
Medicago truncatula chr8 1 CH_mtr_287 3 4 0.000000101282
Oryza sativa ssp. japonica chr09 1 CH_osa_21 5 6 0.0000000000000196051
Petunia axillaris Peaxi162Scf00295 1 CH_pax_118 3 3 0.000000891016
Punica granatum NC_045129.1 1 CH_pgr_329 2 2 0.000450214
Pisum sativum chr7LG7 1 CH_psa_195 3 18 0.0000332737
Papaver somniferum NW_020624377.1 1 CH_pso_295 3 4 0.000000669583
Populus trichocarpa Chr07 1 CH_ptr_391 2 2 0.0001734
Quercus lobata 6 1 CH_qlo_135 5 6 0.000000000000017906
Rosa chinensis RcHm_v2.0_Chr2 1 CH_rch_235 4 23 0.0000000252222
Rhododendron simsii chr08 1 CH_rsi_227 3 4 0.0000008744
Rhododendron simsii chr10 1 CH_rsi_258 3 6 0.00000437087
Striga asiatica scaffold47 1 CH_sas_16 3 5 0.000000234635
Salix brachista GWHAAZH00000007 1 CH_sbr_299 2 2 0.000189042
Simmondsia chinensis GWHAASQ00000016 1 CH_sci_266 2 2 0.000510856
Solanum lycopersicum SL4.0ch05 1 CH_sly_49 5 5 0.0000000000000224344
Schrenkiella parvula ch3-6 1 CH_spa_262 2 2 0.000472404
Solanum pennellii Spenn-ch05 1 CH_spe_10 7 8 3.86448e-21
Solanum tuberosum ST4.03ch05 1 CH_stu_51 5 5 0.000000000000013036
Selenicereus undatus Scaffold_33677 1 CH_sun_254 2 2 0.000435983
Theobroma cacao Chromosome_1 1 CH_tca_178 3 4 0.000000321816
Trifolium pratense Tp57577_TGAC_v2_LG3 1 CH_tpr_78 3 3 0.0000000343818
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_376 2 2 0.000557543
Vigna mungo CM024069.1 1 CH_vmu_359 2 2 0.000387685
Zea mays 7 1 CH_zma_12 5 5 0.00000000000000646019
Anthoceros agrestis Sc2ySwM_117 2 CH_aag_47 3 7 0.00000675996
Aethionema arabicum LG-8 2 CH_aar_273 2 2 0.000912326
Acer truncatum chr4 2 CH_acertr_507 2 2 0.000422982
Aquilegia oxysepala CHR06 2 CH_aox_235 2 2 0.000240597
Brassica carinata ChrB05 2 CH_bca_100 4 7 0.0000000003384
Brassica oleracea C7 2 CH_bol_446 2 3 0.000980536
Beta vulgaris Chr6_EL10_PGA_scaffold0 2 CH_bvu_275 2 2 0.00049675
Camellia sinensis var. sinensis Chr1 2 CH_camsi_32 6 7 8.94194e-19
Corylus avellana 8 2 CH_cav_167 3 7 0.00000308499
Chara braunii BFEA01000343 2 CH_cbr_80 3 24 0.000156776
Citrus clementina scaffold_7 2 CH_ccl_143 3 3 0.000000100941
Ceratophyllum demersum 2 2 CH_cde_192 2 2 0.000236939
Carya illinoinensis Chr03 2 CH_cil_492 2 2 0.000371897
Chlamydomonas reinhardtii chromosome_6 2 CH_cre_34 2 2 0.000113733
Daucus carota DCARv2_Chr9 2 CH_dca_481 2 2 0.000956663
Daucus carota DCARv2_Chr5 2 CH_dca_482 2 2 0.000956663
Erigeron canadensis Conyza_canadensis_scaffold:2 2 CH_eca_368 2 2 0.000134617
Eucalyptus grandis Chr08 2 CH_egr_467 3 3 0.000000179842
Fragaria vesca Fvb1 2 CH_fve_409 2 2 0.000353461
Gossypium hirsutum A11 2 CH_ghi_844 2 2 0.000747644
Gossypium hirsutum D11 2 CH_ghi_845 2 2 0.000747644
Glycine max Gm08 2 CH_gma_523 2 2 0.000379557
Gossypium raimondii Chr07 2 CH_gra_365 2 2 0.000321664
Helianthus annuus HanXRQChr09 2 CH_han_515 2 2 0.000115929
Hydrangea macrophylla Hma1.2p1_0308F.1 2 CH_hma_365 2 2 0.000333259
Lactuca sativa Lsat_1_v8_lg_4 2 CH_lsa_407 2 2 0.000154202
Magnolia biondii Chr02 2 CH_mbi_470 2 2 0.000145698
Oryza sativa ssp. japonica chr09 2 CH_osa_21 5 6 0.0000000000000196051
Petunia axillaris Peaxi162Scf00295 2 CH_pax_118 3 3 0.000000891016
Punica granatum NC_045129.1 2 CH_pgr_329 2 2 0.000450214
Pisum sativum chr7LG7 2 CH_psa_195 3 18 0.0000332737
Papaver somniferum NW_020624377.1 2 CH_pso_295 3 4 0.000000669583
Populus trichocarpa Chr07 2 CH_ptr_391 2 2 0.0001734
Quercus lobata 6 2 CH_qlo_135 5 6 0.000000000000017906
Rosa chinensis RcHm_v2.0_Chr2 2 CH_rch_235 4 23 0.0000000252222
Rhododendron simsii chr08 2 CH_rsi_227 3 4 0.0000008744
Rhododendron simsii chr10 2 CH_rsi_258 3 6 0.00000437087
Striga asiatica scaffold47 2 CH_sas_16 3 5 0.000000234635
Salix brachista GWHAAZH00000007 2 CH_sbr_299 2 2 0.000189042
Simmondsia chinensis GWHAASQ00000016 2 CH_sci_266 2 2 0.000510856
Solanum lycopersicum SL4.0ch05 2 CH_sly_49 5 5 0.0000000000000224344
Schrenkiella parvula ch3-6 2 CH_spa_262 2 2 0.000472404
Solanum pennellii Spenn-ch05 2 CH_spe_10 7 8 3.86448e-21
Solanum tuberosum ST4.03ch05 2 CH_stu_51 5 5 0.000000000000013036
Selenicereus undatus Scaffold_33677 2 CH_sun_254 2 2 0.000435983
Theobroma cacao Chromosome_1 2 CH_tca_178 3 4 0.000000321816
Trifolium pratense Tp57577_TGAC_v2_LG3 2 CH_tpr_78 3 3 0.0000000343818
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_376 2 2 0.000557543
Vigna mungo CM024069.1 2 CH_vmu_359 2 2 0.000387685
Zea mays 7 2 CH_zma_12 5 5 0.00000000000000646019

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001