Functional clusters
Information
- Type MapMan
- Description Solute transport.carrier-mediated transport.MFS superfamily.anion transporter (Fabaceae-N70)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_228 | 1 | CH_aag_112 | 3 | 9 | 0.0000972477 |
| Amborella trichopoda | AmTr_v1.0_scaffold00013 | 1 | CH_atr_33 | 5 | 5 | 0.000000000000236626 |
| Brassica carinata | ChrB06 | 1 | CH_bca_209 | 5 | 17 | 0.0000000403482 |
| Cannabis sativa | NC_044371.1 | 1 | CH_cansat_81 | 4 | 4 | 0.00000000259939 |
| Corylus avellana | 11 | 1 | CH_cav_303 | 3 | 4 | 0.000158408 |
| Citrus clementina | scaffold_4 | 1 | CH_ccl_227 | 3 | 3 | 0.00000978115 |
| Carpinus fangiana | Cfa04 | 1 | CH_cfa_201 | 3 | 3 | 0.0000426755 |
| Carpinus fangiana | Cfa01 | 1 | CH_cfa_29 | 7 | 11 | 0.0000000000000164577 |
| Cardamine hirsuta | Chr4 | 1 | CH_chi_178 | 3 | 3 | 0.00000694453 |
| Carya illinoinensis | Chr02 | 1 | CH_cil_117 | 5 | 5 | 0.0000000000222964 |
| Carya illinoinensis | Chr01 | 1 | CH_cil_118 | 5 | 5 | 0.0000000000222964 |
| Citrullus lanatus | CG_Chr03 | 1 | CH_cla_7 | 7 | 10 | 0.0000000000000015918 |
| Citrullus lanatus | CG_Chr06 | 1 | CH_cla_93 | 3 | 3 | 0.0000238935 |
| Cucumis melo | chr10 | 1 | CH_cme_214 | 3 | 5 | 0.000173359 |
| Cucumis melo | chr04 | 1 | CH_cme_215 | 3 | 5 | 0.000173359 |
| Cucumis melo | chr12 | 1 | CH_cme_34 | 7 | 27 | 0.00000000000400931 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3333 | 1 | CH_cqu_299 | 3 | 3 | 0.0000332727 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1675 | 1 | CH_cqu_43 | 6 | 6 | 0.0000000000000206304 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3422 | 1 | CH_cqu_75 | 5 | 6 | 0.00000000014916 |
| Cucumis sativus L. | chr1 | 1 | CH_csa_103 | 4 | 4 | 0.0000000549145 |
| Cucumis sativus L. | chr5 | 1 | CH_csa_22 | 7 | 8 | 5.6036e-16 |
| Cucumis sativus L. | chr1 | 1 | CH_csa_24 | 8 | 18 | 0.00000000000000304645 |
| Daucus carota | DCARv2_Chr4 | 1 | CH_dca_183 | 3 | 3 | 0.0000093964 |
| Davidia involucrata | GWHABJS00000019 | 1 | CH_din_235 | 3 | 4 | 0.0000390027 |
| Davidia involucrata | GWHABJS00000009 | 1 | CH_din_282 | 3 | 5 | 0.0000974622 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 1 | CH_eca_207 | 3 | 3 | 0.00000465133 |
| Eucalyptus grandis | Chr07 | 1 | CH_egr_72 | 10 | 20 | 2.10447e-22 |
| Fragaria vesca | Fvb3 | 1 | CH_fve_215 | 3 | 3 | 0.00000504439 |
| Fragaria vesca | Fvb7 | 1 | CH_fve_420 | 3 | 9 | 0.000422756 |
| Glycine max | Gm10 | 1 | CH_gma_301 | 3 | 3 | 0.0000197493 |
| Glycine max | Gm20 | 1 | CH_gma_302 | 3 | 3 | 0.0000197493 |
| Helianthus annuus | HanXRQChr16 | 1 | CH_han_173 | 6 | 37 | 0.00000000211502 |
| Lupinus albus | Lalb_Chr06 | 1 | CH_lal_163 | 3 | 4 | 0.0000292568 |
| Lotus japonicus | chr2 | 1 | CH_lja_133 | 4 | 5 | 0.000000197085 |
| Lonicera japonica | GWHAAZE00000003 | 1 | CH_lonja_41 | 9 | 29 | 1.0905e-17 |
| Malus domestica | Chr01 | 1 | CH_mdo_180 | 4 | 5 | 0.0000000294027 |
| Malus domestica | Chr06 | 1 | CH_mdo_340 | 3 | 3 | 0.000010699 |
| Malus domestica | Chr11 | 1 | CH_mdo_396 | 3 | 4 | 0.0000427777 |
| Medicago truncatula | chr1 | 1 | CH_mtr_190 | 4 | 4 | 0.00000000184259 |
| Olea europaea | chr10 | 1 | CH_oeu_55 | 4 | 7 | 0.0000000290426 |
| Petunia axillaris | Peaxi162Scf00145 | 1 | CH_pax_323 | 3 | 8 | 0.000472875 |
| Prunus persica | Pp06 | 1 | CH_ppe_212 | 4 | 9 | 0.000000758345 |
| Prunus persica | Pp02 | 1 | CH_ppe_265 | 3 | 3 | 0.00000951582 |
| Pisum sativum | chr6LG2 | 1 | CH_psa_201 | 3 | 6 | 0.000045676 |
| Papaver somniferum | NC_039364.1 | 1 | CH_pso_206 | 4 | 5 | 0.0000000279584 |
| Papaver somniferum | NC_039359.1 | 1 | CH_pso_364 | 3 | 3 | 0.0000115513 |
| Papaver somniferum | NC_039366.1 | 1 | CH_pso_41 | 7 | 11 | 1.8134e-16 |
| Papaver somniferum | NW_020628818.1 | 1 | CH_pso_76 | 7 | 23 | 0.00000000000013408 |
| Phaseolus vulgaris | Chr07 | 1 | CH_pvu_222 | 3 | 3 | 0.00000923132 |
| Quercus lobata | 7 | 1 | CH_qlo_376 | 4 | 4 | 0.0000000377339 |
| Quercus lobata | 8 | 1 | CH_qlo_95 | 8 | 14 | 7.08471e-17 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 1 | CH_rch_440 | 3 | 4 | 0.0000219243 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 1 | CH_rch_510 | 3 | 5 | 0.0000547916 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 1 | CH_rch_540 | 3 | 6 | 0.000109545 |
| Rhododendron simsii | chr01 | 1 | CH_rsi_289 | 3 | 3 | 0.0000162409 |
| Rhododendron simsii | chr03 | 1 | CH_rsi_43 | 8 | 16 | 2.94035e-17 |
| Salvia bowleyana | GWHASIU00000004 | 1 | CH_sbo_244 | 4 | 29 | 0.0000258215 |
| Sechium edule | LG01 | 1 | CH_sed_178 | 3 | 3 | 0.0000378685 |
| Sequoiadendron giganteum | chr8 | 1 | CH_sgi_342 | 5 | 9 | 0.000000000756937 |
| Sequoiadendron giganteum | chr2 | 1 | CH_sgi_436 | 4 | 4 | 0.00000000950549 |
| Sequoiadendron giganteum | chr4 | 1 | CH_sgi_634 | 4 | 11 | 0.00000312517 |
| Selaginella moellendorffii | scaffold_10 | 1 | CH_smo_35 | 4 | 9 | 0.000000419105 |
| Trifolium pratense | Tp57577_TGAC_v2_LG1 | 1 | CH_tpr_42 | 4 | 4 | 0.00000000130271 |
| Vaccinium macrocarpon | chr2_Vaccinium_macrocarpon_Stevens_v1 | 1 | CH_vma_160 | 4 | 10 | 0.00000445665 |
| Vaccinium macrocarpon | chr12_Vaccinium_macrocarpon_Stevens_v1 | 1 | CH_vma_187 | 3 | 3 | 0.0000229395 |
| Vigna mungo | CM024071.1 | 1 | CH_vmu_146 | 3 | 3 | 0.0000126757 |
| Vitis vinifera | chr13 | 1 | CH_vvi_231 | 3 | 4 | 0.0000157892 |
| Zea mays | 2 | 1 | CH_zma_165 | 3 | 4 | 0.0000513642 |
| Anthoceros agrestis | Sc2ySwM_228 | 2 | CH_aag_112 | 3 | 9 | 0.0000972477 |
| Amborella trichopoda | AmTr_v1.0_scaffold00013 | 2 | CH_atr_33 | 5 | 5 | 0.000000000000236626 |
| Brassica carinata | ChrB06 | 2 | CH_bca_209 | 5 | 17 | 0.0000000403482 |
| Cannabis sativa | NC_044371.1 | 2 | CH_cansat_81 | 4 | 4 | 0.00000000259939 |
| Corylus avellana | 11 | 2 | CH_cav_303 | 3 | 4 | 0.000158408 |
| Citrus clementina | scaffold_4 | 2 | CH_ccl_227 | 3 | 3 | 0.00000978115 |
| Carpinus fangiana | Cfa04 | 2 | CH_cfa_201 | 3 | 3 | 0.0000426755 |
| Carpinus fangiana | Cfa01 | 2 | CH_cfa_29 | 7 | 11 | 0.0000000000000164577 |
| Cardamine hirsuta | Chr4 | 2 | CH_chi_178 | 3 | 3 | 0.00000694453 |
| Carya illinoinensis | Chr02 | 2 | CH_cil_117 | 5 | 5 | 0.0000000000222964 |
| Carya illinoinensis | Chr01 | 2 | CH_cil_118 | 5 | 5 | 0.0000000000222964 |
| Citrullus lanatus | CG_Chr03 | 2 | CH_cla_7 | 7 | 10 | 0.0000000000000015918 |
| Citrullus lanatus | CG_Chr06 | 2 | CH_cla_93 | 3 | 3 | 0.0000238935 |
| Cucumis melo | chr10 | 2 | CH_cme_214 | 3 | 5 | 0.000173359 |
| Cucumis melo | chr04 | 2 | CH_cme_215 | 3 | 5 | 0.000173359 |
| Cucumis melo | chr12 | 2 | CH_cme_34 | 7 | 27 | 0.00000000000400931 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3333 | 2 | CH_cqu_299 | 3 | 3 | 0.0000332727 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1675 | 2 | CH_cqu_43 | 6 | 6 | 0.0000000000000206304 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3422 | 2 | CH_cqu_75 | 5 | 6 | 0.00000000014916 |
| Cucumis sativus L. | chr1 | 2 | CH_csa_103 | 4 | 4 | 0.0000000549145 |
| Cucumis sativus L. | chr5 | 2 | CH_csa_22 | 7 | 8 | 5.6036e-16 |
| Cucumis sativus L. | chr1 | 2 | CH_csa_24 | 8 | 18 | 0.00000000000000304645 |
| Daucus carota | DCARv2_Chr4 | 2 | CH_dca_183 | 3 | 3 | 0.0000093964 |
| Davidia involucrata | GWHABJS00000019 | 2 | CH_din_235 | 3 | 4 | 0.0000390027 |
| Davidia involucrata | GWHABJS00000009 | 2 | CH_din_282 | 3 | 5 | 0.0000974622 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 2 | CH_eca_207 | 3 | 3 | 0.00000465133 |
| Eucalyptus grandis | Chr01 | 2 | CH_egr_613 | 3 | 3 | 0.0000187755 |
| Eucalyptus grandis | Chr07 | 2 | CH_egr_72 | 10 | 20 | 2.10447e-22 |
| Fragaria vesca | Fvb3 | 2 | CH_fve_215 | 3 | 3 | 0.00000504439 |
| Fragaria vesca | Fvb7 | 2 | CH_fve_420 | 3 | 9 | 0.000422756 |
| Glycine max | Gm10 | 2 | CH_gma_301 | 3 | 3 | 0.0000197493 |
| Glycine max | Gm20 | 2 | CH_gma_302 | 3 | 3 | 0.0000197493 |
| Helianthus annuus | HanXRQChr16 | 2 | CH_han_173 | 6 | 37 | 0.00000000211502 |
| Lupinus albus | Lalb_Chr06 | 2 | CH_lal_163 | 3 | 4 | 0.0000292568 |
| Lotus japonicus | chr2 | 2 | CH_lja_133 | 4 | 5 | 0.000000197085 |
| Lotus japonicus | chr5 | 2 | CH_lja_238 | 3 | 3 | 0.0000380447 |
| Lonicera japonica | GWHAAZE00000003 | 2 | CH_lonja_41 | 9 | 29 | 1.0905e-17 |
| Malus domestica | Chr01 | 2 | CH_mdo_180 | 4 | 5 | 0.0000000294027 |
| Malus domestica | Chr06 | 2 | CH_mdo_340 | 3 | 3 | 0.000010699 |
| Malus domestica | Chr11 | 2 | CH_mdo_396 | 3 | 4 | 0.0000427777 |
| Olea europaea | chr10 | 2 | CH_oeu_55 | 4 | 7 | 0.0000000290426 |
| Petunia axillaris | Peaxi162Scf00145 | 2 | CH_pax_323 | 3 | 8 | 0.000472875 |
| Prunus persica | Pp06 | 2 | CH_ppe_212 | 4 | 9 | 0.000000758345 |
| Prunus persica | Pp02 | 2 | CH_ppe_265 | 3 | 3 | 0.00000951582 |
| Pisum sativum | chr6LG2 | 2 | CH_psa_201 | 3 | 6 | 0.000045676 |
| Papaver somniferum | NC_039364.1 | 2 | CH_pso_206 | 4 | 5 | 0.0000000279584 |
| Papaver somniferum | NC_039359.1 | 2 | CH_pso_364 | 3 | 3 | 0.0000115513 |
| Papaver somniferum | NC_039366.1 | 2 | CH_pso_41 | 7 | 11 | 1.8134e-16 |
| Papaver somniferum | NW_020628818.1 | 2 | CH_pso_76 | 7 | 23 | 0.00000000000013408 |
| Phaseolus vulgaris | Chr07 | 2 | CH_pvu_222 | 3 | 3 | 0.00000923132 |
| Quercus lobata | 7 | 2 | CH_qlo_376 | 4 | 4 | 0.0000000377339 |
| Quercus lobata | 8 | 2 | CH_qlo_95 | 8 | 14 | 7.08471e-17 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 2 | CH_rch_440 | 3 | 4 | 0.0000219243 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 2 | CH_rch_510 | 3 | 5 | 0.0000547916 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 2 | CH_rch_540 | 3 | 6 | 0.000109545 |
| Rhododendron simsii | chr01 | 2 | CH_rsi_289 | 3 | 3 | 0.0000162409 |
| Rhododendron simsii | chr03 | 2 | CH_rsi_43 | 8 | 16 | 2.94035e-17 |
| Salvia bowleyana | GWHASIU00000004 | 2 | CH_sbo_244 | 4 | 29 | 0.0000258215 |
| Sechium edule | LG01 | 2 | CH_sed_178 | 3 | 3 | 0.0000378685 |
| Sequoiadendron giganteum | chr8 | 2 | CH_sgi_342 | 5 | 9 | 0.000000000756937 |
| Sequoiadendron giganteum | chr2 | 2 | CH_sgi_436 | 4 | 4 | 0.00000000950549 |
| Sequoiadendron giganteum | chr4 | 2 | CH_sgi_634 | 4 | 11 | 0.00000312517 |
| Selaginella moellendorffii | scaffold_10 | 2 | CH_smo_35 | 4 | 9 | 0.000000419105 |
| Trifolium pratense | Tp57577_TGAC_v2_LG1 | 2 | CH_tpr_42 | 4 | 4 | 0.00000000130271 |
| Vaccinium macrocarpon | chr2_Vaccinium_macrocarpon_Stevens_v1 | 2 | CH_vma_160 | 4 | 10 | 0.00000445665 |
| Vaccinium macrocarpon | chr12_Vaccinium_macrocarpon_Stevens_v1 | 2 | CH_vma_187 | 3 | 3 | 0.0000229395 |
| Vigna mungo | CM024071.1 | 2 | CH_vmu_146 | 3 | 3 | 0.0000126757 |
| Vitis vinifera | chr13 | 2 | CH_vvi_231 | 3 | 4 | 0.0000157892 |
| Zea mays | 2 | 2 | CH_zma_165 | 3 | 4 | 0.0000513642 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |