Functional clusters
Information
- Type MapMan
- Description Solute transport.carrier-mediated transport.MFS superfamily.organic anion transporter (OATP)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Erigeron canadensis | Conyza_canadensis_scaffold:5 | 1 | CH_eca_13 | 6 | 7 | 8.02412e-19 |
Fragaria x ananassa | Fvb2-2 | 1 | CH_fan_51 | 4 | 5 | 0.0000000000199558 |
Helianthus annuus | HanXRQChr05 | 1 | CH_han_589 | 2 | 2 | 0.000231857 |
Lactuca sativa | Lsat_1_v8_lg_9 | 1 | CH_lsa_48 | 5 | 7 | 0.00000000000000659679 |
Nelumbo nucifera | chr5 | 1 | CH_nnu_286 | 2 | 2 | 0.0000436015 |
Olea europaea | chr3 | 1 | CH_oeu_389 | 2 | 2 | 0.000533789 |
Pisum sativum | chr7LG7 | 1 | CH_psa_379 | 2 | 2 | 0.000521635 |
Sequoiadendron giganteum | chr10 | 1 | CH_sgi_924 | 2 | 2 | 0.0000487151 |
Sapria himalayana | scaffold8_16897533 | 1 | CH_shi_117 | 2 | 2 | 0.0000571804 |
Solanum lycopersicum | SL4.0ch11 | 1 | CH_sly_423 | 2 | 2 | 0.000176082 |
Solanum tuberosum | ST4.03ch11 | 1 | CH_stu_446 | 2 | 3 | 0.000153732 |
Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 1 | CH_vma_50 | 4 | 4 | 0.0000000000120374 |
Vanilla planifolia | CM028153.1 | 1 | CH_vpl_188 | 2 | 2 | 0.000073888 |
Erigeron canadensis | Conyza_canadensis_scaffold:5 | 2 | CH_eca_13 | 6 | 7 | 8.02412e-19 |
Fragaria x ananassa | Fvb2-2 | 2 | CH_fan_51 | 4 | 5 | 0.0000000000199558 |
Helianthus annuus | HanXRQChr05 | 2 | CH_han_589 | 2 | 2 | 0.000231857 |
Lactuca sativa | Lsat_1_v8_lg_9 | 2 | CH_lsa_48 | 5 | 7 | 0.00000000000000659679 |
Nelumbo nucifera | chr5 | 2 | CH_nnu_286 | 2 | 2 | 0.0000436015 |
Olea europaea | chr3 | 2 | CH_oeu_389 | 2 | 2 | 0.000533789 |
Pisum sativum | chr7LG7 | 2 | CH_psa_379 | 2 | 2 | 0.000521635 |
Sequoiadendron giganteum | chr10 | 2 | CH_sgi_924 | 2 | 2 | 0.0000487151 |
Sapria himalayana | scaffold8_16897533 | 2 | CH_shi_117 | 2 | 2 | 0.0000571804 |
Solanum lycopersicum | SL4.0ch11 | 2 | CH_sly_423 | 2 | 2 | 0.000176082 |
Solanum tuberosum | ST4.03ch11 | 2 | CH_stu_446 | 2 | 3 | 0.000153732 |
Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 2 | CH_vma_50 | 4 | 4 | 0.0000000000120374 |
Vanilla planifolia | CM028153.1 | 2 | CH_vpl_188 | 2 | 2 | 0.000073888 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |