Functional clusters

Information

  • Type MapMan
  • Description Solute transport.carrier-mediated transport.MFS superfamily.N-acetylglucosamine transporter (NGT)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 1 CH_arhy_774 2 3 0.000898109
Arabidopsis thaliana Chr1 1 CH_ath_398 2 7 0.00060159
Coffea canephora chr2 1 CH_ccan_61 3 11 0.00000000448916
Carpinus fangiana Cfa06 1 CH_cfa_239 2 2 0.0000757346
Citrullus lanatus CG_Chr10 1 CH_cla_216 2 3 0.000798344
Cucumis melo chr07 1 CH_cme_222 2 3 0.000200127
Cucumis sativus L. chr4 1 CH_csa_217 2 2 0.0000834759
Fragaria vesca Fvb7 1 CH_fve_381 2 4 0.00035344
Magnolia biondii Chr04 1 CH_mbi_110 3 3 0.00000000353808
Malus domestica Chr01 1 CH_mdo_67 4 4 0.000000000000818014
Medicago truncatula chr3 1 CH_mtr_587 2 3 0.000123256
Olea europaea chr11 1 CH_oeu_180 2 2 0.0000533789
Populus trichocarpa Chr12 1 CH_ptr_316 2 2 0.0000578001
Rhododendron simsii chr03 1 CH_rsi_360 2 2 0.0000645307
Sequoiadendron giganteum chr10 1 CH_sgi_455 3 3 0.0000000142393
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_262 2 2 0.0000929238
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 2 CH_arhy_774 2 3 0.000898109
Arabidopsis thaliana Chr1 2 CH_ath_398 2 7 0.00060159
Coffea canephora chr2 2 CH_ccan_61 3 11 0.00000000448916
Carpinus fangiana Cfa06 2 CH_cfa_239 2 2 0.0000757346
Citrullus lanatus CG_Chr10 2 CH_cla_216 2 3 0.000798344
Cucumis melo chr07 2 CH_cme_222 2 3 0.000200127
Cucumis sativus L. chr4 2 CH_csa_217 2 2 0.0000834759
Eucalyptus grandis Chr11 2 CH_egr_791 2 2 0.000175582
Fragaria vesca Fvb7 2 CH_fve_381 2 4 0.00035344
Magnolia biondii Chr04 2 CH_mbi_110 3 3 0.00000000353808
Malus domestica Chr01 2 CH_mdo_67 4 4 0.000000000000818014
Olea europaea chr11 2 CH_oeu_180 2 2 0.0000533789
Populus trichocarpa Chr12 2 CH_ptr_316 2 2 0.0000578001
Rhododendron simsii chr03 2 CH_rsi_360 2 2 0.0000645307
Sequoiadendron giganteum chr10 2 CH_sgi_455 3 3 0.0000000142393
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_262 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001