Functional clusters
Information
- Type MapMan
- Description Solute transport.carrier-mediated transport.nucleoside transporter (ENT)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_3 | 1 | CH_amhyb_276 | 2 | 2 | 0.000841751 |
| Beta vulgaris | Chr6_EL10_PGA_scaffold0 | 1 | CH_bvu_104 | 3 | 4 | 0.000000411243 |
| Camellia sinensis var. sinensis | Chr8 | 1 | CH_camsi_130 | 5 | 11 | 0.0000000000946657 |
| Camellia sinensis var. sinensis | Chr8 | 1 | CH_camsi_206 | 4 | 6 | 0.0000000103215 |
| Cardamine hirsuta | Chr2 | 1 | CH_chi_112 | 4 | 9 | 0.0000000411505 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3035 | 1 | CH_cqu_199 | 3 | 3 | 0.00000074089 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2715 | 1 | CH_cqu_245 | 3 | 4 | 0.00000296301 |
| Davidia involucrata | GWHABJS00000018 | 1 | CH_din_515 | 2 | 2 | 0.000750188 |
| Helianthus annuus | HanXRQChr12 | 1 | CH_han_300 | 3 | 3 | 0.00000125437 |
| Magnolia biondii | Chr11 | 1 | CH_mbi_50 | 5 | 5 | 0.0000000000000537076 |
| Medicago truncatula | chr2 | 1 | CH_mtr_208 | 4 | 7 | 0.00000000360342 |
| Olea europaea | chr13 | 1 | CH_oeu_330 | 2 | 2 | 0.000320273 |
| Sequoiadendron giganteum | chr10 | 1 | CH_sgi_1045 | 2 | 3 | 0.000146142 |
| Sapria himalayana | scaffold38_5640129 | 1 | CH_shi_221 | 2 | 2 | 0.000571804 |
| Vaccinium macrocarpon | chr4_Vaccinium_macrocarpon_Stevens_v1 | 1 | CH_vma_440 | 2 | 2 | 0.000929238 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_3 | 2 | CH_amhyb_276 | 2 | 2 | 0.000841751 |
| Beta vulgaris | Chr6_EL10_PGA_scaffold0 | 2 | CH_bvu_104 | 3 | 4 | 0.000000411243 |
| Camellia sinensis var. sinensis | Chr8 | 2 | CH_camsi_130 | 5 | 11 | 0.0000000000946657 |
| Camellia sinensis var. sinensis | Chr8 | 2 | CH_camsi_206 | 4 | 6 | 0.0000000103215 |
| Cardamine hirsuta | Chr2 | 2 | CH_chi_112 | 4 | 9 | 0.0000000411505 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3035 | 2 | CH_cqu_199 | 3 | 3 | 0.00000074089 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2715 | 2 | CH_cqu_245 | 3 | 4 | 0.00000296301 |
| Davidia involucrata | GWHABJS00000018 | 2 | CH_din_515 | 2 | 2 | 0.000750188 |
| Helianthus annuus | HanXRQChr12 | 2 | CH_han_300 | 3 | 3 | 0.00000125437 |
| Magnolia biondii | Chr11 | 2 | CH_mbi_50 | 5 | 5 | 0.0000000000000537076 |
| Olea europaea | chr13 | 2 | CH_oeu_330 | 2 | 2 | 0.000320273 |
| Sequoiadendron giganteum | chr10 | 2 | CH_sgi_1045 | 2 | 3 | 0.000146142 |
| Sapria himalayana | scaffold38_5640129 | 2 | CH_shi_221 | 2 | 2 | 0.000571804 |
| Vaccinium macrocarpon | chr4_Vaccinium_macrocarpon_Stevens_v1 | 2 | CH_vma_440 | 2 | 2 | 0.000929238 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |