Functional clusters

Information

  • Type MapMan
  • Description Solute transport.primary active transport.V-type ATPase complex.peripheral V1 subcomplex.subunit H

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group0 1 CH_ach_139 2 2 0.000162964
Arabidopsis lyrata scaffold_7 1 CH_aly_364 2 2 0.000396027
Amborella trichopoda AmTr_v1.0_scaffold00037 1 CH_atr_79 3 3 0.0000000378665
Coffea canephora chr9 1 CH_ccan_192 2 7 0.0000425888
Citrus clementina scaffold_4 1 CH_ccl_147 3 6 0.000000201856
Ceratophyllum demersum 2 1 CH_cde_229 2 2 0.000473878
Cardamine hirsuta Chr7 1 CH_chi_231 2 2 0.0000691204
Magnolia biondii Chr07 1 CH_mbi_584 2 5 0.000485625
Malus domestica Chr01 1 CH_mdo_714 2 4 0.000682538
Pisum sativum chr4LG4 1 CH_psa_220 2 2 0.0000521635
Papaver somniferum NC_039358.1 1 CH_pso_666 2 5 0.00067566
Phaseolus vulgaris Chr03 1 CH_pvu_278 2 2 0.0000734727
Striga asiatica scaffold340 1 CH_sas_113 2 2 0.000375223
Salvia bowleyana GWHASIU00000001 1 CH_sbo_414 2 2 0.00045498
Salvia bowleyana GWHASIU00000001 1 CH_sbo_415 2 2 0.00045498
Sapria himalayana scaffold3_21451142 1 CH_shi_102 2 3 0.0000571804
Solanum tuberosum ST4.03ch07 1 CH_stu_462 2 2 0.000153736
Trochodendron aralioides group16 1 CH_tar_352 2 2 0.00018011
Vigna mungo CM024069.1 1 CH_vmu_198 2 2 0.0000646141
Actinidia chinensis Lachesis_group0 2 CH_ach_139 2 2 0.000162964
Arabidopsis lyrata scaffold_7 2 CH_aly_364 2 2 0.000396027
Amborella trichopoda AmTr_v1.0_scaffold00037 2 CH_atr_79 3 3 0.0000000378665
Coffea canephora chr9 2 CH_ccan_192 2 7 0.0000425888
Citrus clementina scaffold_4 2 CH_ccl_147 3 6 0.000000201856
Ceratophyllum demersum 2 2 CH_cde_229 2 2 0.000473878
Cardamine hirsuta Chr7 2 CH_chi_231 2 2 0.0000691204
Magnolia biondii Chr07 2 CH_mbi_584 2 5 0.000485625
Malus domestica Chr01 2 CH_mdo_714 2 4 0.000682538
Pisum sativum chr4LG4 2 CH_psa_220 2 2 0.0000521635
Papaver somniferum NC_039358.1 2 CH_pso_666 2 5 0.00067566
Phaseolus vulgaris Chr03 2 CH_pvu_278 2 2 0.0000734727
Striga asiatica scaffold340 2 CH_sas_113 2 2 0.000375223
Salvia bowleyana GWHASIU00000001 2 CH_sbo_414 2 2 0.00045498
Salvia bowleyana GWHASIU00000001 2 CH_sbo_415 2 2 0.00045498
Sapria himalayana scaffold3_21451142 2 CH_shi_102 2 3 0.0000571804
Solanum tuberosum ST4.03ch07 2 CH_stu_462 2 2 0.000153736
Trochodendron aralioides group16 2 CH_tar_352 2 2 0.00018011
Vigna mungo CM024069.1 2 CH_vmu_198 2 2 0.0000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001