Functional clusters

Information

  • Type MapMan
  • Description Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).central subcomplex.nucleoporin (NUP58)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_3 1 CH_amhyb_195 2 2 0.000252525
Brassica carinata ChrB03 1 CH_bca_1040 2 3 0.000641272
Salix brachista GWHAAZH00000007 1 CH_sbr_60 4 9 0.0000000000945746
Sequoiadendron giganteum chr9 1 CH_sgi_770 2 2 0.0000487151
Vanilla planifolia CM028156.1 1 CH_vpl_153 2 2 0.000073888
Amaranthus hybridus AmaHy_arrow1_Scaffold_3 2 CH_amhyb_195 2 2 0.000252525
Brassica carinata ChrB03 2 CH_bca_1040 2 3 0.000641272
Salix brachista GWHAAZH00000007 2 CH_sbr_60 4 9 0.0000000000945746
Sequoiadendron giganteum chr9 2 CH_sgi_770 2 2 0.0000487151
Vanilla planifolia CM028156.1 2 CH_vpl_153 2 2 0.000073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001