Functional clusters

Information

  • Type MapMan
  • Description Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).central subcomplex.nucleoporin (NUP62)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr5 1 CH_acertr_122 3 5 0.0000000745448
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.12 1 CH_arhy_671 2 3 0.000538871
Cannabis sativa NC_044374.1 1 CH_cansat_322 2 4 0.000393959
Carica papaya supercontig_22 1 CH_cpa_175 2 2 0.0000950661
Micromonas commoda Chr_01 1 CH_mco_9 2 2 0.000197961
Punica granatum NC_045131.1 1 CH_pgr_305 2 4 0.00045018
Quercus lobata 4 1 CH_qlo_549 3 13 0.00000457212
Vanilla planifolia CM028150.1 1 CH_vpl_311 2 2 0.000443328
Acer truncatum chr5 2 CH_acertr_122 3 5 0.0000000745448
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.12 2 CH_arhy_671 2 3 0.000538871
Cannabis sativa NC_044374.1 2 CH_cansat_322 2 4 0.000393959
Carica papaya supercontig_22 2 CH_cpa_175 2 2 0.0000950661
Micromonas commoda Chr_01 2 CH_mco_9 2 2 0.000197961
Punica granatum NC_045131.1 2 CH_pgr_305 2 4 0.00045018
Quercus lobata 4 2 CH_qlo_549 3 13 0.00000457212
Vanilla planifolia CM028150.1 2 CH_vpl_311 2 2 0.000443328

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001