Functional clusters

Information

  • Type MapMan
  • Description Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).central subcomplex.nucleoporin (NUP98)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC05 1 CH_bca_191 4 35 0.0000000229962
Camellia sinensis var. sinensis Chr2 1 CH_camsi_200 4 11 0.00000000667764
Erythranthe guttata scaffold_2 1 CH_egut_102 4 10 0.00000000121575
Lonicera japonica GWHAAZE00000002 1 CH_lonja_581 2 3 0.00053896
Medicago truncatula chr1 1 CH_mtr_501 2 2 0.0000410863
Olea europaea scaffold948 1 CH_oeu_220 2 2 0.000160137
Oryza sativa ssp. japonica chr12 1 CH_osa_263 2 2 0.000158437
Solanum tuberosum ST4.03ch02 1 CH_stu_434 2 3 0.000153732
Brassica carinata ChrC05 2 CH_bca_191 4 35 0.0000000229962
Camellia sinensis var. sinensis Chr2 2 CH_camsi_200 4 11 0.00000000667764
Erythranthe guttata scaffold_2 2 CH_egut_102 4 10 0.00000000121575
Lonicera japonica GWHAAZE00000002 2 CH_lonja_581 2 3 0.00053896
Olea europaea scaffold948 2 CH_oeu_220 2 2 0.000160137
Oryza sativa ssp. japonica chr12 2 CH_osa_263 2 2 0.000158437
Solanum tuberosum ST4.03ch02 2 CH_stu_434 2 3 0.000153732

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001