Functional clusters

Information

  • Type MapMan
  • Description Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.scaffold nucleoporin (NUP155)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Ceratophyllum demersum 4 1 CH_cde_218 2 2 0.000473878
Ceratophyllum demersum 5 1 CH_cde_219 2 2 0.000473878
Erigeron canadensis Conyza_canadensis_scaffold:7 1 CH_eca_339 2 2 0.000134617
Malus domestica Chr16 1 CH_mdo_441 2 2 0.000113763
Sequoiadendron giganteum chr9 1 CH_sgi_768 2 2 0.0000487151
Utricularia gibba unitig_27 1 CH_ugi_128 2 2 0.0000734592
Vitis vinifera chr1 1 CH_vvi_325 2 2 0.000228189
Ceratophyllum demersum 4 2 CH_cde_218 2 2 0.000473878
Ceratophyllum demersum 5 2 CH_cde_219 2 2 0.000473878
Erigeron canadensis Conyza_canadensis_scaffold:7 2 CH_eca_339 2 2 0.000134617
Malus domestica Chr16 2 CH_mdo_441 2 2 0.000113763
Sequoiadendron giganteum chr9 2 CH_sgi_768 2 2 0.0000487151
Utricularia gibba unitig_27 2 CH_ugi_128 2 2 0.0000734592
Vitis vinifera chr1 2 CH_vvi_325 2 2 0.000228189

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001