Functional clusters

Information

  • Type MapMan
  • Description Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.scaffold nucleoporin (NUP188)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr6 1 CH_camsi_608 2 3 0.000137561
Corylus avellana 1 1 CH_cav_235 2 2 0.0000766695
Citrullus lanatus CG_Chr02 1 CH_cla_150 2 3 0.000266123
Carica papaya supercontig_37 1 CH_cpa_173 2 2 0.0000950661
Durio zibethinus NW_019168048.1 1 CH_dzi_189 2 2 0.0000463489
Fragaria x ananassa Fvb2-1 1 CH_fan_419 2 2 0.000185036
Glycine max Gm11 1 CH_gma_367 2 2 0.000113867
Malus domestica Chr10 1 CH_mdo_162 3 3 0.00000000862825
Sequoiadendron giganteum chr3 1 CH_sgi_438 3 4 0.000000014239
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_213 2 2 0.0000929238
Vanilla planifolia CM028151.1 1 CH_vpl_63 3 9 0.000000687762
Camellia sinensis var. sinensis Chr6 2 CH_camsi_608 2 3 0.000137561
Corylus avellana 1 2 CH_cav_235 2 2 0.0000766695
Citrullus lanatus CG_Chr02 2 CH_cla_150 2 3 0.000266123
Carica papaya supercontig_37 2 CH_cpa_173 2 2 0.0000950661
Durio zibethinus NW_019168048.1 2 CH_dzi_189 2 2 0.0000463489
Fragaria x ananassa Fvb2-1 2 CH_fan_419 2 2 0.000185036
Glycine max Gm11 2 CH_gma_367 2 2 0.000113867
Malus domestica Chr10 2 CH_mdo_162 3 3 0.00000000862825
Sequoiadendron giganteum chr3 2 CH_sgi_438 3 4 0.000000014239
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_213 2 2 0.0000929238
Vanilla planifolia CM028151.1 2 CH_vpl_63 3 9 0.000000687762

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001