Functional clusters

Information

  • Type MapMan
  • Description Protein translocation.peroxisome.importomer translocation system.receptor export system.Pex1-Pex6 subcomplex.component Pex1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cardamine hirsuta Chr6 1 CH_chi_213 2 2 0.0000691204
Davidia involucrata GWHABJS00000005 1 CH_din_244 2 2 0.0000500125
Lonicera japonica GWHAAZE00000004 1 CH_lonja_351 2 2 0.0000598874
Salvia bowleyana GWHASIU00000005 1 CH_sbo_275 2 2 0.000045498
Simmondsia chinensis GWHAASQ00000007 1 CH_sci_207 2 2 0.000255428
Sechium edule LG01 1 CH_sed_193 2 2 0.0000713419
Sequoiadendron giganteum chr6 1 CH_sgi_766 2 2 0.0000487151
Sapria himalayana scaffold75_2171804 1 CH_shi_72 2 3 0.0000571804
Cardamine hirsuta Chr6 2 CH_chi_213 2 2 0.0000691204
Davidia involucrata GWHABJS00000005 2 CH_din_244 2 2 0.0000500125
Lonicera japonica GWHAAZE00000004 2 CH_lonja_351 2 2 0.0000598874
Salvia bowleyana GWHASIU00000005 2 CH_sbo_275 2 2 0.000045498
Simmondsia chinensis GWHAASQ00000007 2 CH_sci_207 2 2 0.000255428
Sechium edule LG01 2 CH_sed_193 2 2 0.0000713419
Sequoiadendron giganteum chr6 2 CH_sgi_766 2 2 0.0000487151
Sapria himalayana scaffold75_2171804 2 CH_shi_72 2 3 0.0000571804

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001