Functional clusters
Information
- Type MapMan
- Description Protein translocation.chloroplast.outer envelope TOC translocation system
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Prasinoderma coloniale | Chr21 | 1 | CH_pco_13 | 2 | 2 | 0.000837404 |
| Vanilla planifolia | CM028159.1 | 1 | CH_vpl_114 | 3 | 6 | 0.0000137499 |
| Prasinoderma coloniale | Chr21 | 2 | CH_pco_13 | 2 | 2 | 0.000837404 |
| Vanilla planifolia | CM028159.1 | 2 | CH_vpl_114 | 3 | 6 | 0.0000137499 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| 23.1.2.1 | Protein translocation.chloroplast.outer envelope TOC translocation system.translocation channel (Toc75-III) | 2 |
| 23.1.2.2 | Protein translocation.chloroplast.outer envelope TOC translocation system.receptor GTPase (Toc90/120/132/159) | 18 |
| 23.1.2.3 | Protein translocation.chloroplast.outer envelope TOC translocation system.receptor GTPase (Toc33/Toc34) | 8 |
| 23.1.2.5 | Protein translocation.chloroplast.outer envelope TOC translocation system.regulatory factor (Toc12) | 12 |
| 23.1.2.6 | Protein translocation.chloroplast.outer envelope TOC translocation system.regulatory kinase (KOG1) | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |