Functional clusters
Information
- Type MapMan
- Description Vesicle trafficking.exocytic trafficking.Exocyst complex.component EXO70
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.17 | 1 | CH_arhy_38 | 9 | 21 | 1.89599e-19 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.07 | 1 | CH_arhy_45 | 8 | 13 | 1.54557e-18 |
| Brassica carinata | ChrC02 | 1 | CH_bca_56 | 6 | 11 | 0.00000000000787458 |
| Brassica carinata | ChrB02 | 1 | CH_bca_739 | 5 | 63 | 0.000159539 |
| Brassica carinata | ChrB02 | 1 | CH_bca_903 | 3 | 5 | 0.000425826 |
| Brassica napus | C04 | 1 | CH_bna_134 | 5 | 10 | 0.00000000385329 |
| Brassica napus | A05 | 1 | CH_bna_436 | 3 | 3 | 0.0000348592 |
| Brassica oleracea | C4 | 1 | CH_bol_42 | 5 | 7 | 0.00000000011819 |
| Brassica rapa | A05 | 1 | CH_bra_179 | 3 | 5 | 0.0000214818 |
| Cicer arietinum L. | Ca_LG2_v3 | 1 | CH_car_7 | 6 | 18 | 0.000000000064337 |
| Coffea canephora | chr4 | 1 | CH_ccan_80 | 4 | 49 | 0.000000150077 |
| Carya illinoinensis | Chr13 | 1 | CH_cil_312 | 3 | 3 | 0.0000168567 |
| Cucumis sativus L. | chr6 | 1 | CH_csa_164 | 3 | 3 | 0.0000119162 |
| Daucus carota | DCARv2_Chr1 | 1 | CH_dca_10 | 8 | 12 | 1.4834e-18 |
| Davidia involucrata | GWHABJS00000014 | 1 | CH_din_46 | 6 | 12 | 0.0000000000527237 |
| Davidia involucrata | GWHABJS00000013 | 1 | CH_din_8 | 8 | 8 | 5.31671e-20 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 1 | CH_eca_242 | 3 | 4 | 0.0000244435 |
| Eucalyptus grandis | Chr10 | 1 | CH_egr_232 | 5 | 6 | 0.00000000000613863 |
| Erythranthe guttata | scaffold_9 | 1 | CH_egut_259 | 3 | 4 | 0.0000362487 |
| Glycine max | Gm02 | 1 | CH_gma_314 | 3 | 3 | 0.0000286202 |
| Glycine max | Gm14 | 1 | CH_gma_473 | 3 | 5 | 0.000285857 |
| Glycine max | Gm06 | 1 | CH_gma_93 | 5 | 7 | 0.000000000354584 |
| Lotus japonicus | Contig00141 | 1 | CH_lja_96 | 4 | 5 | 0.000000026563 |
| Lonicera japonica | GWHAAZE00000008 | 1 | CH_lonja_75 | 8 | 32 | 0.000000000000125067 |
| Magnolia biondii | Chr14 | 1 | CH_mbi_30 | 9 | 53 | 5.97397e-16 |
| Magnolia biondii | Chr19 | 1 | CH_mbi_85 | 5 | 9 | 0.000000000345256 |
| Manihot esculenta | Chromosome10 | 1 | CH_mes_278 | 3 | 4 | 0.0000581371 |
| Medicago truncatula | chr5 | 1 | CH_mtr_26 | 11 | 33 | 5.60772e-24 |
| Olea europaea | chr10 | 1 | CH_oeu_128 | 4 | 20 | 0.000019442 |
| Pisum sativum | chr2LG1 | 1 | CH_psa_66 | 5 | 17 | 0.00000000398042 |
| Populus trichocarpa | Chr17 | 1 | CH_ptr_269 | 3 | 3 | 0.0000146584 |
| Quercus lobata | 7 | 1 | CH_qlo_165 | 6 | 9 | 0.000000000000411087 |
| Quercus lobata | 10 | 1 | CH_qlo_304 | 6 | 29 | 0.00000000229893 |
| Quercus lobata | 1 | 1 | CH_qlo_565 | 4 | 13 | 0.0000080495 |
| Rhododendron simsii | chr12 | 1 | CH_rsi_255 | 3 | 3 | 0.00000424763 |
| Solanum tuberosum | ST4.03ch09 | 1 | CH_stu_346 | 3 | 4 | 0.000027894 |
| Tarenaya hassleriana | NW_010965775.1 | 1 | CH_tha_84 | 3 | 3 | 0.0000129605 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.17 | 2 | CH_arhy_38 | 9 | 21 | 1.89599e-19 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.07 | 2 | CH_arhy_45 | 8 | 13 | 1.54557e-18 |
| Brassica carinata | ChrC02 | 2 | CH_bca_56 | 6 | 11 | 0.00000000000787458 |
| Brassica carinata | ChrB02 | 2 | CH_bca_739 | 5 | 63 | 0.000159539 |
| Brassica carinata | ChrB02 | 2 | CH_bca_903 | 3 | 5 | 0.000425826 |
| Brassica oleracea | C4 | 2 | CH_bol_42 | 5 | 7 | 0.00000000011819 |
| Brassica rapa | A05 | 2 | CH_bra_179 | 3 | 5 | 0.0000214818 |
| Cicer arietinum L. | Ca_LG2_v3 | 2 | CH_car_7 | 6 | 18 | 0.000000000064337 |
| Coffea canephora | chr4 | 2 | CH_ccan_80 | 4 | 49 | 0.000000150077 |
| Carya illinoinensis | Chr13 | 2 | CH_cil_312 | 3 | 3 | 0.0000168567 |
| Cucumis sativus L. | chr6 | 2 | CH_csa_164 | 3 | 3 | 0.0000119162 |
| Daucus carota | DCARv2_Chr1 | 2 | CH_dca_10 | 8 | 12 | 1.4834e-18 |
| Davidia involucrata | GWHABJS00000014 | 2 | CH_din_46 | 6 | 12 | 0.0000000000527237 |
| Davidia involucrata | GWHABJS00000013 | 2 | CH_din_8 | 8 | 8 | 5.31671e-20 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 2 | CH_eca_242 | 3 | 4 | 0.0000244435 |
| Eucalyptus grandis | Chr10 | 2 | CH_egr_232 | 5 | 6 | 0.00000000000613863 |
| Erythranthe guttata | scaffold_9 | 2 | CH_egut_259 | 3 | 4 | 0.0000362487 |
| Glycine max | Gm02 | 2 | CH_gma_314 | 3 | 3 | 0.0000286202 |
| Glycine max | Gm14 | 2 | CH_gma_473 | 3 | 5 | 0.000285857 |
| Glycine max | Gm06 | 2 | CH_gma_93 | 5 | 7 | 0.000000000354584 |
| Lotus japonicus | Contig00141 | 2 | CH_lja_96 | 4 | 5 | 0.000000026563 |
| Lonicera japonica | GWHAAZE00000008 | 2 | CH_lonja_75 | 8 | 32 | 0.000000000000125067 |
| Magnolia biondii | Chr14 | 2 | CH_mbi_30 | 9 | 53 | 5.97397e-16 |
| Magnolia biondii | Chr19 | 2 | CH_mbi_85 | 5 | 9 | 0.000000000345256 |
| Manihot esculenta | Chromosome10 | 2 | CH_mes_278 | 3 | 4 | 0.0000581371 |
| Olea europaea | chr10 | 2 | CH_oeu_128 | 4 | 20 | 0.000019442 |
| Pisum sativum | chr2LG1 | 2 | CH_psa_66 | 5 | 17 | 0.00000000398042 |
| Populus trichocarpa | Chr17 | 2 | CH_ptr_269 | 3 | 3 | 0.0000146584 |
| Quercus lobata | 7 | 2 | CH_qlo_165 | 6 | 9 | 0.000000000000411087 |
| Quercus lobata | 10 | 2 | CH_qlo_304 | 6 | 29 | 0.00000000229893 |
| Quercus lobata | 1 | 2 | CH_qlo_565 | 4 | 13 | 0.0000080495 |
| Rhododendron simsii | chr12 | 2 | CH_rsi_255 | 3 | 3 | 0.00000424763 |
| Solanum tuberosum | ST4.03ch09 | 2 | CH_stu_346 | 3 | 4 | 0.000027894 |
| Tarenaya hassleriana | NW_010965775.1 | 2 | CH_tha_84 | 3 | 3 | 0.0000129605 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |