Functional clusters
Information
- Type MapMan
- Description Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.VPS4-VTA1 ESCRT-disassembly complex.ATPase component VPS4/SKD1
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Brassica carinata | ChrB07 | 1 | CH_bca_859 | 2 | 2 | 0.000320646 |
Camellia sinensis var. sinensis | Chr7 | 1 | CH_camsi_726 | 2 | 2 | 0.000275128 |
Carya illinoinensis | Chr13 | 1 | CH_cil_466 | 2 | 4 | 0.000371874 |
Cucumis melo | chr11 | 1 | CH_cme_181 | 2 | 2 | 0.0000667111 |
Quercus lobata | 1 | 1 | CH_qlo_1048 | 2 | 3 | 0.000929264 |
Solanum lycopersicum | SL4.0ch11 | 1 | CH_sly_413 | 2 | 2 | 0.000176082 |
Solanum pennellii | Spenn-ch11 | 1 | CH_spe_359 | 2 | 2 | 0.000133437 |
Brassica carinata | ChrB07 | 2 | CH_bca_859 | 2 | 2 | 0.000320646 |
Camellia sinensis var. sinensis | Chr7 | 2 | CH_camsi_726 | 2 | 2 | 0.000275128 |
Carya illinoinensis | Chr13 | 2 | CH_cil_466 | 2 | 4 | 0.000371874 |
Cucumis melo | chr11 | 2 | CH_cme_181 | 2 | 2 | 0.0000667111 |
Quercus lobata | 1 | 2 | CH_qlo_1048 | 2 | 3 | 0.000929264 |
Solanum lycopersicum | SL4.0ch11 | 2 | CH_sly_413 | 2 | 2 | 0.000176082 |
Solanum pennellii | Spenn-ch11 | 2 | CH_spe_359 | 2 | 2 | 0.000133437 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |