Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.VPS4-VTA1 ESCRT-disassembly complex.ATPase component VPS4/SKD1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB07 1 CH_bca_859 2 2 0.000320646
Camellia sinensis var. sinensis Chr7 1 CH_camsi_726 2 2 0.000275128
Carya illinoinensis Chr13 1 CH_cil_466 2 4 0.000371874
Cucumis melo chr11 1 CH_cme_181 2 2 0.0000667111
Quercus lobata 1 1 CH_qlo_1048 2 3 0.000929264
Solanum lycopersicum SL4.0ch11 1 CH_sly_413 2 2 0.000176082
Solanum pennellii Spenn-ch11 1 CH_spe_359 2 2 0.000133437
Brassica carinata ChrB07 2 CH_bca_859 2 2 0.000320646
Camellia sinensis var. sinensis Chr7 2 CH_camsi_726 2 2 0.000275128
Carya illinoinensis Chr13 2 CH_cil_466 2 4 0.000371874
Cucumis melo chr11 2 CH_cme_181 2 2 0.0000667111
Quercus lobata 1 2 CH_qlo_1048 2 3 0.000929264
Solanum lycopersicum SL4.0ch11 2 CH_sly_413 2 2 0.000176082
Solanum pennellii Spenn-ch11 2 CH_spe_359 2 2 0.000133437

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001