Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.post-Golgi trafficking.target membrane fusion.regulation.regulatory protein (alpha-SNAP/SEC17)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB01 1 CH_bca_927 2 2 0.000448905
Corylus avellana 6 1 CH_cav_416 2 2 0.000460017
Daucus carota DCARv2_Chr8 1 CH_dca_100 3 5 0.0000000610117
Erigeron canadensis Conyza_canadensis_scaffold:7 1 CH_eca_390 2 2 0.000269233
Fragaria vesca Fvb2 1 CH_fve_394 2 2 0.000353461
Olea europaea chr9 1 CH_oeu_374 2 2 0.000533789
Rosa chinensis RcHm_v2.0_Chr6 1 CH_rch_102 4 4 0.000000000000950388
Salvia bowleyana GWHASIU00000003 1 CH_sbo_413 2 2 0.00045498
Vanilla planifolia CM028150.1 1 CH_vpl_115 3 15 0.0000148932
Brassica carinata ChrB01 2 CH_bca_927 2 2 0.000448905
Corylus avellana 6 2 CH_cav_416 2 2 0.000460017
Daucus carota DCARv2_Chr8 2 CH_dca_100 3 5 0.0000000610117
Erigeron canadensis Conyza_canadensis_scaffold:7 2 CH_eca_390 2 2 0.000269233
Fragaria vesca Fvb2 2 CH_fve_394 2 2 0.000353461
Olea europaea chr9 2 CH_oeu_374 2 2 0.000533789
Rosa chinensis RcHm_v2.0_Chr6 2 CH_rch_102 4 4 0.000000000000950388
Salvia bowleyana GWHASIU00000003 2 CH_sbo_413 2 2 0.00045498
Vanilla planifolia CM028150.1 2 CH_vpl_115 3 15 0.0000148932

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001