Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.Qc-type SNARE components.SYP5-group component

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_1 1 CH_aly_297 2 2 0.000198013
Arabidopsis thaliana Chr1 1 CH_ath_101 3 4 0.0000000196984
Cardamine hirsuta Chr1 1 CH_chi_290 2 2 0.000207361
Populus trichocarpa Chr16 1 CH_ptr_419 2 2 0.000346801
Populus trichocarpa Chr06 1 CH_ptr_420 2 2 0.000346801
Striga asiatica scaffold97 1 CH_sas_125 2 3 0.000562805
Arabidopsis lyrata scaffold_1 2 CH_aly_297 2 2 0.000198013
Arabidopsis thaliana Chr1 2 CH_ath_101 3 4 0.0000000196984
Cardamine hirsuta Chr1 2 CH_chi_290 2 2 0.000207361
Populus trichocarpa Chr16 2 CH_ptr_419 2 2 0.000346801
Populus trichocarpa Chr06 2 CH_ptr_420 2 2 0.000346801
Striga asiatica scaffold97 2 CH_sas_125 2 3 0.000562805

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001