Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.Qa-type SNARE components.SYP2-group component

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC09 1 CH_bca_278 3 3 0.000000249498
Cannabis sativa NC_044379.1 1 CH_cansat_334 2 2 0.000393985
Cicer arietinum L. Ca_LG3_v3 1 CH_car_262 2 2 0.000466981
Carya illinoinensis Chr05 1 CH_cil_552 2 2 0.000929742
Chenopodium quinoa C_Quinoa_Scaffold_3489 1 CH_cqu_531 2 2 0.000710732
Fragaria x ananassa Fvb6-1 1 CH_fan_339 3 15 0.0000385271
Magnolia biondii Chr18 1 CH_mbi_271 3 7 0.0000103964
Magnolia biondii Chr15 1 CH_mbi_358 3 10 0.0000489855
Punica granatum NC_045130.1 1 CH_pgr_315 2 2 0.000450214
Papaver somniferum NC_039362.1 1 CH_pso_223 3 3 0.0000000639203
Papaver somniferum NC_039367.1 1 CH_pso_695 2 2 0.000810838
Sequoiadendron giganteum chr10 1 CH_sgi_481 3 3 0.0000000355983
Brassica carinata ChrC09 2 CH_bca_278 3 3 0.000000249498
Cannabis sativa NC_044379.1 2 CH_cansat_334 2 2 0.000393985
Cicer arietinum L. Ca_LG3_v3 2 CH_car_262 2 2 0.000466981
Carya illinoinensis Chr05 2 CH_cil_552 2 2 0.000929742
Chenopodium quinoa C_Quinoa_Scaffold_3489 2 CH_cqu_531 2 2 0.000710732
Fragaria x ananassa Fvb6-1 2 CH_fan_339 3 15 0.0000385271
Magnolia biondii Chr18 2 CH_mbi_271 3 7 0.0000103964
Magnolia biondii Chr15 2 CH_mbi_358 3 10 0.0000489855
Punica granatum NC_045130.1 2 CH_pgr_315 2 2 0.000450214
Papaver somniferum NC_039362.1 2 CH_pso_223 3 3 0.0000000639203
Papaver somniferum NC_039367.1 2 CH_pso_695 2 2 0.000810838
Sequoiadendron giganteum chr10 2 CH_sgi_481 3 3 0.0000000355983

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001