Functional clusters
Information
- Type MapMan
- Description Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.Qa-type SNARE components.SYP1-group component
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.20 | 1 | CH_arhy_334 | 5 | 75 | 0.00000344131 |
| Brassica carinata | ChrB06 | 1 | CH_bca_951 | 3 | 9 | 0.000484867 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 1 | CH_bvu_112 | 3 | 3 | 0.000000863699 |
| Carpinus fangiana | Cfa08 | 1 | CH_cfa_115 | 3 | 3 | 0.000000301137 |
| Fragaria x ananassa | Fvb6-3 | 1 | CH_fan_248 | 3 | 3 | 0.00000399052 |
| Fragaria x ananassa | Fvb6-2 | 1 | CH_fan_249 | 3 | 3 | 0.00000399052 |
| Fragaria x ananassa | Fvb6-1 | 1 | CH_fan_407 | 3 | 7 | 0.000139531 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.20 | 2 | CH_arhy_334 | 5 | 75 | 0.00000344131 |
| Brassica carinata | ChrB06 | 2 | CH_bca_951 | 3 | 9 | 0.000484867 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 2 | CH_bvu_112 | 3 | 3 | 0.000000863699 |
| Carpinus fangiana | Cfa08 | 2 | CH_cfa_115 | 3 | 3 | 0.000000301137 |
| Fragaria x ananassa | Fvb6-3 | 2 | CH_fan_248 | 3 | 3 | 0.00000399052 |
| Fragaria x ananassa | Fvb6-2 | 2 | CH_fan_249 | 3 | 3 | 0.00000399052 |
| Fragaria x ananassa | Fvb6-1 | 2 | CH_fan_407 | 3 | 7 | 0.000139531 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |