Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.post-Golgi trafficking.vesicle tethering.HOPS/CORVET tethering complexes.HOPS-specific component VPS41/VAM2

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Fragaria x ananassa Fvb3-2 1 CH_fan_134 3 6 0.000000102709
Marchantia polymorpha scaffold_52 1 CH_mpo_92 2 3 0.000331309
Nelumbo nucifera chr2 1 CH_nnu_435 2 2 0.000654022
Quercus lobata 3 1 CH_qlo_802 2 2 0.000154887
Rosa chinensis RcHm_v2.0_Chr5 1 CH_rch_554 2 3 0.000119593
Fragaria x ananassa Fvb3-2 2 CH_fan_134 3 6 0.000000102709
Marchantia polymorpha scaffold_52 2 CH_mpo_92 2 3 0.000331309
Nelumbo nucifera chr2 2 CH_nnu_435 2 2 0.000654022
Quercus lobata 3 2 CH_qlo_802 2 2 0.000154887
Rosa chinensis RcHm_v2.0_Chr5 2 CH_rch_554 2 3 0.000119593

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001