Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.post-Golgi trafficking.vesicle tethering.HOPS/CORVET tethering complexes.component VPS33

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 1 CH_arhy_216 3 3 0.0000000752906
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 1 CH_arhy_739 2 2 0.000838273
Fragaria x ananassa Fvb5-4 1 CH_fan_623 2 2 0.000832663
Fragaria x ananassa Fvb5-2 1 CH_fan_624 2 2 0.000832663
Lupinus albus Lalb_Chr21 1 CH_lal_200 2 2 0.0000524824
Petunia axillaris Peaxi162Scf00176 1 CH_pax_293 2 4 0.000422104
Quercus lobata 8 1 CH_qlo_284 4 18 0.00000000126298
Rosa chinensis RcHm_v2.0_Chr7 1 CH_rch_233 3 3 0.0000000238391
Sequoiadendron giganteum chr9 1 CH_sgi_1028 2 3 0.000146142
Trifolium pratense Tp57577_TGAC_v2_scaf_566 1 CH_tpr_229 2 2 0.0000756974
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 2 CH_arhy_216 3 3 0.0000000752906
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 2 CH_arhy_739 2 2 0.000838273
Fragaria x ananassa Fvb5-4 2 CH_fan_623 2 2 0.000832663
Fragaria x ananassa Fvb5-2 2 CH_fan_624 2 2 0.000832663
Lupinus albus Lalb_Chr21 2 CH_lal_200 2 2 0.0000524824
Petunia axillaris Peaxi162Scf00176 2 CH_pax_293 2 4 0.000422104
Quercus lobata 8 2 CH_qlo_284 4 18 0.00000000126298
Rosa chinensis RcHm_v2.0_Chr7 2 CH_rch_233 3 3 0.0000000238391
Sequoiadendron giganteum chr9 2 CH_sgi_1028 2 3 0.000146142
Trifolium pratense Tp57577_TGAC_v2_scaf_566 2 CH_tpr_229 2 2 0.0000756974

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001