Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.post-Golgi trafficking.vesicle tethering.GARP/EARP complexes.component VPS52/POK

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_228 1 CH_aag_100 2 2 0.0000802568
Arabidopsis lyrata scaffold_2 1 CH_aly_228 2 2 0.0000660044
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.16 1 CH_arhy_761 2 5 0.000898083
Arabidopsis thaliana Chr1 1 CH_ath_336 2 5 0.00028648
Camellia sinensis var. sinensis Chr6 1 CH_camsi_906 2 4 0.000825322
Chara braunii BFEA01000068 1 CH_cbr_91 2 3 0.000215773
Ceratophyllum demersum 12 1 CH_cde_139 2 3 0.000236929
Capsella rubella scaffold_2 1 CH_cru_309 2 3 0.000219338
Magnolia biondii Chr16 1 CH_mbi_455 2 3 0.000145698
Vanilla planifolia CM028151.1 1 CH_vpl_338 3 71 0.000466892
Anthoceros agrestis Sc2ySwM_228 2 CH_aag_100 2 2 0.0000802568
Arabidopsis lyrata scaffold_2 2 CH_aly_228 2 2 0.0000660044
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.16 2 CH_arhy_761 2 5 0.000898083
Arabidopsis thaliana Chr1 2 CH_ath_336 2 5 0.00028648
Camellia sinensis var. sinensis Chr6 2 CH_camsi_906 2 4 0.000825322
Chara braunii BFEA01000068 2 CH_cbr_91 2 3 0.000215773
Ceratophyllum demersum 12 2 CH_cde_139 2 3 0.000236929
Capsella rubella scaffold_2 2 CH_cru_309 2 3 0.000219338
Magnolia biondii Chr16 2 CH_mbi_455 2 3 0.000145698
Vanilla planifolia CM028151.1 2 CH_vpl_338 3 71 0.000466892

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001