Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase membrane association.RAB-GDI displacement factor (GDF) activities.A-class Rab-GDF protein

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Daucus carota DCARv2_Chr3 1 CH_dca_223 2 2 0.0000637775
Durio zibethinus NW_019167937.1 1 CH_dzi_306 2 3 0.000417124
Lonicera japonica GWHAAZE00000003 1 CH_lonja_451 2 2 0.000179662
Manihot esculenta Chromosome10 1 CH_mes_34 7 16 1.68083e-18
Nelumbo nucifera chr8 1 CH_nnu_357 2 2 0.000261609
Salvia bowleyana GWHASIU00000003 1 CH_sbo_328 2 2 0.000136494
Sequoiadendron giganteum chr9 1 CH_sgi_1289 2 5 0.000487116
Daucus carota DCARv2_Chr3 2 CH_dca_223 2 2 0.0000637775
Durio zibethinus NW_019167937.1 2 CH_dzi_306 2 3 0.000417124
Gossypium hirsutum D04 2 CH_ghi_767 2 2 0.000560733
Lonicera japonica GWHAAZE00000003 2 CH_lonja_451 2 2 0.000179662
Manihot esculenta Chromosome10 2 CH_mes_34 7 16 1.68083e-18
Nelumbo nucifera chr8 2 CH_nnu_357 2 2 0.000261609
Salvia bowleyana GWHASIU00000003 2 CH_sbo_328 2 2 0.000136494
Sequoiadendron giganteum chr9 2 CH_sgi_1289 2 5 0.000487116

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001