Functional clusters
Information
- Type MapMan
- Description Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase membrane association.RAB-GTPase geranylgeranyltransferase (RGT) complex.accessory subunit
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Cicer arietinum L. | Ca_LG8_v3 | 1 | CH_car_144 | 2 | 2 | 0.0000778301 |
| Hydrangea macrophylla | Hma1.2p1_0085F.1 | 1 | CH_hma_405 | 2 | 3 | 0.000999685 |
| Sapria himalayana | scaffold1_25991295 | 1 | CH_shi_131 | 3 | 49 | 0.0000902425 |
| Cicer arietinum L. | Ca_LG8_v3 | 2 | CH_car_144 | 2 | 2 | 0.0000778301 |
| Hydrangea macrophylla | Hma1.2p1_0085F.1 | 2 | CH_hma_405 | 2 | 3 | 0.000999685 |
| Sapria himalayana | scaffold1_25991295 | 2 | CH_shi_131 | 3 | 49 | 0.0000902425 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |