Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase membrane association.RAB-GTPase geranylgeranyltransferase (RGT) complex.subunit alpha

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Helianthus annuus HanXRQChr08 1 CH_han_496 2 2 0.000115929
Salvia bowleyana GWHASIU00000008 1 CH_sbo_274 2 2 0.000045498
Sequoiadendron giganteum chr11 1 CH_sgi_145 5 5 2.53473e-16
Sapria himalayana scaffold9_16683904 1 CH_shi_71 2 2 0.0000571804
Vitis vinifera chr18 1 CH_vvi_256 2 2 0.000076063
Helianthus annuus HanXRQChr08 2 CH_han_496 2 2 0.000115929
Salvia bowleyana GWHASIU00000008 2 CH_sbo_274 2 2 0.000045498
Sequoiadendron giganteum chr11 2 CH_sgi_145 5 5 2.53473e-16
Sapria himalayana scaffold9_16683904 2 CH_shi_71 2 2 0.0000571804
Vitis vinifera chr18 2 CH_vvi_256 2 2 0.000076063

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001