Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase guanyl-nucleotide exchange.RAB-H1 GTPase nucleotide exchange factor (LOT)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Carpinus fangiana scaffold10 1 CH_cfa_381 2 5 0.00075726
Citrullus lanatus CG_Chr10 1 CH_cla_36 3 4 0.0000000472183
Olea europaea chr14 1 CH_oeu_35 3 3 0.00000000427407
Rhododendron simsii chr06 1 CH_rsi_83 4 5 0.0000000000201547
Sequoiadendron giganteum chr2 1 CH_sgi_849 2 2 0.0000487151
Solanum tuberosum ST4.03ch11 1 CH_stu_382 2 2 0.0000512453
Utricularia gibba unitig_578 1 CH_ugi_157 2 2 0.0000734592
Carpinus fangiana scaffold10 2 CH_cfa_381 2 5 0.00075726
Citrullus lanatus CG_Chr10 2 CH_cla_36 3 4 0.0000000472183
Olea europaea chr14 2 CH_oeu_35 3 3 0.00000000427407
Rhododendron simsii chr06 2 CH_rsi_83 4 5 0.0000000000201547
Sequoiadendron giganteum chr2 2 CH_sgi_849 2 2 0.0000487151
Solanum tuberosum ST4.03ch11 2 CH_stu_382 2 2 0.0000512453
Utricularia gibba unitig_578 2 CH_ugi_157 2 2 0.0000734592

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001