Functional clusters
Information
- Type MapMan
- Description Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase activation.RAB-GTPase-activating protein (RAB-GAP)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | ChrC07 | 1 | CH_bca_557 | 3 | 3 | 0.000028558 |
| Theobroma cacao | Chromosome_7 | 1 | CH_tca_212 | 4 | 12 | 0.00000177895 |
| Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 1 | CH_vma_181 | 3 | 3 | 0.0000147663 |
| Brassica carinata | ChrC07 | 2 | CH_bca_557 | 3 | 3 | 0.000028558 |
| Theobroma cacao | Chromosome_7 | 2 | CH_tca_212 | 4 | 12 | 0.00000177895 |
| Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 2 | CH_vma_181 | 3 | 3 | 0.0000147663 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |