Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.post-Golgi trafficking.coat protein recruiting.ARF-GTPase guanyl-nucleotide exchange.ARF-GEF factor (BIG)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata Contig324 1 CH_bca_1137 2 3 0.000961902
Carya illinoinensis Chr05 1 CH_cil_553 2 2 0.000929742
Gossypium hirsutum D12 1 CH_ghi_321 3 3 0.00000103632
Physcomitrium patens Chr21 1 CH_ppa_20 4 10 0.0000000182453
Sequoiadendron giganteum chr6 1 CH_sgi_1027 2 3 0.000146142
Brassica carinata Contig324 2 CH_bca_1137 2 3 0.000961902
Carya illinoinensis Chr05 2 CH_cil_553 2 2 0.000929742
Gossypium hirsutum D12 2 CH_ghi_321 3 3 0.00000103632
Physcomitrium patens Chr21 2 CH_ppa_20 4 10 0.0000000182453
Sequoiadendron giganteum chr6 2 CH_sgi_1027 2 3 0.000146142

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001