Functional clusters
Information
- Type MapMan
- Description Vesicle trafficking.post-Golgi trafficking.coat protein recruiting.ARF-GTPase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 1 | CH_arhy_378 | 3 | 4 | 0.0000108821 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 1 | CH_arhy_409 | 3 | 5 | 0.0000271985 |
| Coffea canephora | chr2 | 1 | CH_ccan_84 | 3 | 12 | 0.000000182822 |
| Erythranthe guttata | scaffold_4 | 1 | CH_egut_125 | 4 | 6 | 0.00000000859582 |
| Helianthus annuus | HanXRQChr05 | 1 | CH_han_318 | 3 | 3 | 0.0000018278 |
| Physcomitrium patens | Chr12 | 1 | CH_ppa_62 | 3 | 4 | 0.0000126108 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 2 | CH_arhy_378 | 3 | 4 | 0.0000108821 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 2 | CH_arhy_409 | 3 | 5 | 0.0000271985 |
| Coffea canephora | chr2 | 2 | CH_ccan_84 | 3 | 12 | 0.000000182822 |
| Erythranthe guttata | scaffold_4 | 2 | CH_egut_125 | 4 | 6 | 0.00000000859582 |
| Helianthus annuus | HanXRQChr05 | 2 | CH_han_318 | 3 | 3 | 0.0000018278 |
| Physcomitrium patens | Chr12 | 2 | CH_ppa_62 | 3 | 4 | 0.0000126108 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |