Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.Golgi-ER retrograde trafficking.vesicle tethering.COG tethering complex.component COG7

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica napus A10 1 CH_bna_123 4 19 0.00000000259727
Brassica rapa A10 1 CH_bra_53 4 12 0.000000000587373
Ceratophyllum demersum 2 1 CH_cde_21 3 4 0.0000000374266
Corchorus olitorius AWUE01015379.1 1 CH_col_71 2 2 0.000292099
Hydrangea macrophylla Hma1.2p1_0432F.1 1 CH_hma_218 2 2 0.000111086
Malus domestica Chr07 1 CH_mdo_469 2 2 0.000113763
Simmondsia chinensis GWHAASQ00000014 1 CH_sci_199 2 3 0.000255417
Sequoiadendron giganteum chr7 1 CH_sgi_130 5 5 4.22455e-17
Sapria himalayana scaffold21_10161493 1 CH_shi_97 2 2 0.0000571804
Vanilla planifolia CM028151.1 1 CH_vpl_71 3 11 0.00000135086
Brassica rapa A10 2 CH_bra_53 4 12 0.000000000587373
Ceratophyllum demersum 2 2 CH_cde_21 3 4 0.0000000374266
Corchorus olitorius AWUE01015379.1 2 CH_col_71 2 2 0.000292099
Hydrangea macrophylla Hma1.2p1_0432F.1 2 CH_hma_218 2 2 0.000111086
Malus domestica Chr07 2 CH_mdo_469 2 2 0.000113763
Simmondsia chinensis GWHAASQ00000014 2 CH_sci_199 2 3 0.000255417
Sequoiadendron giganteum chr7 2 CH_sgi_130 5 5 4.22455e-17
Sapria himalayana scaffold21_10161493 2 CH_shi_97 2 2 0.0000571804
Vanilla planifolia CM028151.1 2 CH_vpl_71 3 11 0.00000135086

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001