Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.Golgi-ER retrograde trafficking.vesicle tethering.COG tethering complex.component COG1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr10 1 CH_acertr_69 4 15 0.00000000143431
Chara braunii BFEA01000480 1 CH_cbr_89 2 3 0.000215773
Carpinus fangiana Cfa01 1 CH_cfa_229 2 2 0.0000757346
Davidia involucrata GWHABJS00000015 1 CH_din_335 2 2 0.000150038
Quercus lobata 1 1 CH_qlo_358 3 3 0.0000000159937
Striga asiatica scaffold31 1 CH_sas_132 2 3 0.000562805
Sequoiadendron giganteum chr8 1 CH_sgi_668 3 3 0.0000104125
Acer truncatum chr10 2 CH_acertr_69 4 15 0.00000000143431
Chara braunii BFEA01000480 2 CH_cbr_89 2 3 0.000215773
Carpinus fangiana Cfa01 2 CH_cfa_229 2 2 0.0000757346
Davidia involucrata GWHABJS00000015 2 CH_din_335 2 2 0.000150038
Quercus lobata 1 2 CH_qlo_358 3 3 0.0000000159937
Striga asiatica scaffold31 2 CH_sas_132 2 3 0.000562805
Sequoiadendron giganteum chr8 2 CH_sgi_668 3 3 0.0000104125

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001